* installing *source* package ‘NPBayesImputeCat’ ...
** package ‘NPBayesImputeCat’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/NPBayesImputeCat/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c CData.cpp -o CData.o
In file included from CData.cpp:26:
In static member function 'static void* CArrayND<T>::flat2arrayND_ln(void*, int, int, int*) [with T = int]',
    inlined from 'static void* CArrayND<T>::flat2arrayND(void*, int, int, ...) [with T = int]' at CArrayND.h:77:25:
CArrayND.h:88:36: warning: 'lengths' may be used uninitialized [-Wmaybe-uninitialized]
   88 |                 size[0] = lengths[0];
      |                           ~~~~~~~~~^
CArrayND.h: In static member function 'static void* CArrayND<T>::flat2arrayND(void*, int, int, ...) [with T = int]':
CArrayND.h:68:21: note: 'lengths' declared here
   68 |                 int lengths[20];
      |                     ^~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c CEnv.cpp -o CEnv.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c CLcm.cpp -o CLcm.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c CParam.cpp -o CParam.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c CTrace.cpp -o CTrace.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c SpecialFunctions.cpp -o SpecialFunctions.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c lczmain.cpp -o lczmain.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c margin_conditions.cpp -o margin_conditions.o
In file included from margin_conditions.cpp:23:
In static member function 'static void* CArrayND<T>::flat2arrayND_ln(void*, int, int, int*) [with T = int]',
    inlined from 'static void* CArrayND<T>::flat2arrayND(void*, int, int, ...) [with T = int]' at CArrayND.h:77:25:
CArrayND.h:88:36: warning: 'lengths' may be used uninitialized [-Wmaybe-uninitialized]
   88 |                 size[0] = lengths[0];
      |                           ~~~~~~~~~^
CArrayND.h: In static member function 'static void* CArrayND<T>::flat2arrayND(void*, int, int, ...) [with T = int]':
CArrayND.h:68:21: note: 'lengths' declared here
   68 |                 int lengths[20];
      |                     ^~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o NPBayesImputeCat.so CData.o CEnv.o CLcm.o CParam.o CTrace.o RcppExports.o SpecialFunctions.o lczmain.o margin_conditions.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/NPBayesImputeCat/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/NPBayesImputeCat/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/NPBayesImputeCat/src'
installing to /data/gannet/ripley/R/packages/tests-devel/NPBayesImputeCat.Rcheck/00LOCK-NPBayesImputeCat/00new/NPBayesImputeCat/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (NPBayesImputeCat)