* installing *source* package ‘GeoModels’ ...
** package ‘GeoModels’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
using Fortran compiler: ‘GNU Fortran (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/GeoModels/src'
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c CompositeLikelihood2.c -o CompositeLikelihood2.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c CompositeLikelihood2_ani.c -o CompositeLikelihood2_ani.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c CompositeLikelihoodCond2.c -o CompositeLikelihoodCond2.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c CompositeLikelihoodCond2_ani.c -o CompositeLikelihoodCond2_ani.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c CorrelationFunction.c -o CorrelationFunction.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c Distributions.c -o Distributions.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c GeoModels_init.c -o GeoModels_init.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c Godambe.c -o Godambe.o
In file included from /data/gannet/ripley/R/R-devel/include/R_ext/BLAS.h:36,
from header.h:7,
from Godambe.c:1:
Godambe.c: In function 'Vari_SubSamp':
/data/gannet/ripley/R/R-devel/include/R_ext/RS.h:63:25: warning: 'ecoordx' may be used uninitialized [-Wmaybe-uninitialized]
63 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:490:15: note: in expansion of macro 'R_Free'
490 | if(*grid){R_Free(ecoordx);R_Free(ecoordy);}
| ^~~~~~
Godambe.c:181:13: note: 'ecoordx' was declared here
181 | double *ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*sumgrad,*subvari,*xgrid,*ygrid;
| ^~~~~~~
/data/gannet/ripley/R/R-devel/include/R_ext/RS.h:63:25: warning: 'ecoordy' may be used uninitialized [-Wmaybe-uninitialized]
63 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:490:31: note: in expansion of macro 'R_Free'
490 | if(*grid){R_Free(ecoordx);R_Free(ecoordy);}
| ^~~~~~
Godambe.c:181:22: note: 'ecoordy' was declared here
181 | double *ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*sumgrad,*subvari,*xgrid,*ygrid;
| ^~~~~~~
Godambe.c: In function 'Vari_SubSamp_biv':
/data/gannet/ripley/R/R-devel/include/R_ext/RS.h:63:25: warning: 'ecoordx' may be used uninitialized [-Wmaybe-uninitialized]
63 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:1592:9: note: in expansion of macro 'R_Free'
1592 | R_Free(ecoordx);
| ^~~~~~
Godambe.c:1140:58: note: 'ecoordx' was declared here
1140 | double *gradcortt,*gradcortv,*gradcorvt,*gradcorvv,*ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*score,*subvari,*xgrid,*ygrid;
| ^~~~~~~
/data/gannet/ripley/R/R-devel/include/R_ext/RS.h:63:25: warning: 'ecoordy' may be used uninitialized [-Wmaybe-uninitialized]
63 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:1593:9: note: in expansion of macro 'R_Free'
1593 | R_Free(ecoordy);
| ^~~~~~
Godambe.c:1140:67: note: 'ecoordy' was declared here
1140 | double *gradcortt,*gradcortv,*gradcorvt,*gradcorvv,*ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*score,*subvari,*xgrid,*ygrid;
| ^~~~~~~
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c Gradient.c -o Gradient.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c TB.c -o TB.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c Utility.c -o Utility.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mvndstpack.f -o mvndstpack.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c specfun.f -o specfun.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c weightedleastsquare.c -o weightedleastsquare.o
gcc-14 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o GeoModels.so CompositeLikelihood2.o CompositeLikelihood2_ani.o CompositeLikelihoodCond2.o CompositeLikelihoodCond2_ani.o CorrelationFunction.o Distributions.o GeoModels_init.o Godambe.o Gradient.o TB.o Utility.o mvndstpack.o specfun.o weightedleastsquare.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/GeoModels/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/GeoModels/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/GeoModels/src'
installing to /data/gannet/ripley/R/packages/tests-devel/GeoModels.Rcheck/00LOCK-GeoModels/00new/GeoModels/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeoModels)