* installing *source* package ‘GeoAdjust’ ...
** package ‘GeoAdjust’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/GeoAdjust/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/TMB/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c GeoAdjust_init.cpp -o GeoAdjust_init.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/TMB/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c compute.cpp -o compute.o
In file included from /data/gannet/ripley/R/test-dev/TMB/include/TMB.hpp:222,
                 from compute.cpp:6:
compute.cpp: In instantiation of 'Type objective_function<Type>::operator()() [with Type = CppAD::AD<double>]':
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:1308:6:   required from here
 1308 |     F(); // Run through user template (modifies reportvector)
      |     ~^~
compute.cpp:100:17: warning: unused variable 'num_s' [-Wunused-variable]
  100 |   DATA_INTEGER( num_s );
      |                 ^~~~~
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:260:32: note: in definition of macro 'DATA_INTEGER'
  260 | #define DATA_INTEGER(name) int name(CppAD::Integer(asVector<Type>(      \
      |                                ^~~~
compute.cpp: In instantiation of 'Type objective_function<Type>::operator()() [with Type = double]':
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:2031:7:   required from here
 2031 |       PROTECT( res = asSEXP( pf->operator()() ) );
      |                              ~~~~~~~~~~~~~~^~
compute.cpp:100:17: warning: unused variable 'num_s' [-Wunused-variable]
  100 |   DATA_INTEGER( num_s );
      |                 ^~~~~
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:260:32: note: in definition of macro 'DATA_INTEGER'
  260 | #define DATA_INTEGER(name) int name(CppAD::Integer(asVector<Type>(      \
      |                                ^~~~
compute.cpp: In instantiation of 'Type objective_function<Type>::operator()() [with Type = CppAD::AD<CppAD::AD<double> >]':
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:913:29:   required from 'Type objective_function<Type>::evalUserTemplate() [with Type = CppAD::AD<CppAD::AD<double> >]'
  913 |     Type ans=this->operator()();
      |              ~~~~~~~~~~~~~~~^
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:2112:26:   required from here
 2112 |   y[0]=F.evalUserTemplate();
      |        ~~~~~~~~~~~~~~~~~~^~
compute.cpp:100:17: warning: unused variable 'num_s' [-Wunused-variable]
  100 |   DATA_INTEGER( num_s );
      |                 ^~~~~
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:260:32: note: in definition of macro 'DATA_INTEGER'
  260 | #define DATA_INTEGER(name) int name(CppAD::Integer(asVector<Type>(      \
      |                                ^~~~
compute.cpp: In instantiation of 'Type objective_function<Type>::operator()() [with Type = CppAD::AD<CppAD::AD<CppAD::AD<double> > >]':
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:913:29:   required from 'Type objective_function<Type>::evalUserTemplate() [with Type = CppAD::AD<CppAD::AD<CppAD::AD<double> > >]'
  913 |     Type ans=this->operator()();
      |              ~~~~~~~~~~~~~~~^
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:2361:28:   required from here
 2361 |   y[0] = F.evalUserTemplate();
      |          ~~~~~~~~~~~~~~~~~~^~
compute.cpp:100:17: warning: unused variable 'num_s' [-Wunused-variable]
  100 |   DATA_INTEGER( num_s );
      |                 ^~~~~
/data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:260:32: note: in definition of macro 'DATA_INTEGER'
  260 | #define DATA_INTEGER(name) int name(CppAD::Integer(asVector<Type>(      \
      |                                ^~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o GeoAdjust.so GeoAdjust_init.o compute.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/GeoAdjust/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/GeoAdjust/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/GeoAdjust/src'
installing to /data/gannet/ripley/R/packages/tests-devel/GeoAdjust.Rcheck/00LOCK-GeoAdjust/00new/GeoAdjust/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeoAdjust)