• using R Under development (unstable) (2024-11-22 r87365)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (GCC) 14.2.0     GNU Fortran (GCC) 14.2.0
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘DrugUtilisation/DESCRIPTION’ ... OK
• this is package ‘DrugUtilisation’ version ‘0.7.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘DrugUtilisation’ can be installed ... [15s/29s] OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [28s/85s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [426s/282s] ERROR   Running ‘testthat.R’ [426s/281s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/tests.html   > # * https://testthat.r-lib.org/reference/test_package.html#special-files   >   > library(testthat)   > library(DrugUtilisation)   >   > test_check("DrugUtilisation")   Starting 2 test processes   [ FAIL 4 | WARN 24 | SKIP 50 | PASS 69 ]      ══ Skipped tests (50) ══════════════════════════════════════════════════════════   • On CRAN (50): 'test-benchmarkDrugUtilisation.R:2:3',     'test-addDrugUtilisation.R:3:3', 'test-addDrugUtilisation.R:156:3',     'test-addDrugUtilisation.R:196:3', 'test-dailyDose.R:2:3',     'test-generateDrugUtilisationCohortSet.R:2:3',     'test-generateDrugUtilisationCohortSet.R:23:3',     'test-generatedAtcCohortSet.R:2:3',     'test-generatedIngredientCohortSet.R:2:3',     'test-generatedIngredientCohortSet.R:39:3',     'test-generatedIngredientCohortSet.R:54:3',     'test-generatedIngredientCohortSet.R:69:3',     'test-generatedIngredientCohortSet.R:98:3', 'test-drugUse.R:2:3',     'test-drugUse.R:42:3', 'test-drugUse.R:259:3', 'test-drugUse.R:463:3',     'test-drugUse.R:608:3', 'test-drugUse.R:860:3', 'test-drugUse.R:883:3',     'test-drugUse.R:932:3', 'test-drugUse.R:967:3', 'test-drugUse.R:1025:3',     'test-patterns.R:2:3', 'test-plotProportionOfPatientsCovered.R:2:3',     'test-plotProportionOfPatientsCovered.R:58:3',     'test-plotProportionOfPatientsCovered.R:100:3', 'test-plotTreatment.R:2:3',     'test-plots.R:2:3', 'test-readConceptList.R:2:3', 'test-require.R:2:3',     'test-require.R:143:3', 'test-require.R:324:3', 'test-require.R:432:3',     'test-require.R:526:3', 'test-require.R:597:3', 'test-indication.R:2:3',     'test-indication.R:202:3', 'test-indication.R:364:3',     'test-indication.R:481:3',     'test-summariseProportionOfPatientsCovered.R:94:3',     'test-summariseProportionOfPatientsCovered.R:170:3',     'test-summariseProportionOfPatientsCovered.R:277:3',     'test-summariseProportionOfPatientsCovered.R:497:3',     'test-summariseProportionOfPatientsCovered.R:550:3', 'test-tables.R:2:3',     'test-tables.R:132:3', 'test-tables.R:271:3', 'test-tables.R:393:3',     'test-tables.R:502:3'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-summariseDrugRestart.R:76:3'): summarise drug restart ────────   is.na(settings(resultsCohort)$censor_date) is not TRUE      `actual`:   `expected`: TRUE   ── Failure ('test-summariseDrugRestart.R:83:3'): summarise drug restart ────────   unique(resultsSup$estimate_value) (`actual`) not equal to c(NA_character_, "0") (`expected`).      `actual`: "-" "0"   `expected`: NA "0"   ── Failure ('test-summariseTreatment.R:49:3'): test summariseTreatment ─────────   all(...) is not TRUE      `actual`: FALSE   `expected`: TRUE   ── Failure ('test-summariseDrugUtilisation.R:65:3'): summariseDrugUtilisation works ──   all(...) is not TRUE      `actual`: FALSE   `expected`: TRUE      [ FAIL 4 | WARN 24 | SKIP 50 | PASS 69 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [293s/486s] OK
• checking PDF version of manual ... [9s/14s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR