* installing *source* package ‘DeCAFS’ ...
** package ‘DeCAFS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
using C++14
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/DeCAFS/src'
g++-14 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c algorithms.cpp -o algorithms.o
algorithms.cpp: In function 'std::vector<std::tuple<int, double, double, double, double, double> > getMinOfTwoQuads(const std::vector<std::tuple<int, double, double, double, double, double> >&, const std::vector<std::tuple<int, double, double, double, double, double> >&)':
algorithms.cpp:98:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::tuple<int, double, double, double, double, double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   98 |   for (int k = 1; k < outcost.size(); k++) {
      |                   ~~^~~~~~~~~~~~~~~~
algorithms.cpp:106:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::tuple<int, double, double, double, double, double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  106 |   for (int i=0; i < outcost.size(); i++) {
      |                 ~~^~~~~~~~~~~~~~~~
algorithms.cpp: In function 'std::vector<std::tuple<int, double, double, double, double, double> > recomputeIntervals(const std::vector<std::tuple<int, double, double, double, double, double> >&, const double&, const double&, const double&)':
algorithms.cpp:165:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  165 |     if ((i + 1) == index.size()) {
      |         ~~~~~~~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c fpop.cpp -o fpop.o
g++-14 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c fpopmain.cpp -o fpopmain.o
fpopmain.cpp: In function 'std::tuple<std::vector<int, std::allocator<int> >, std::__cxx11::list<double, std::allocator<double> >, std::vector<std::tuple<int, double, double, double, double, double>, std::allocator<std::tuple<int, double, double, double, double, double> > > > FPOPmain(std::vector<double>&, double&, double&, double&, double&, std::string)':
fpopmain.cpp:51:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
   51 |   for (size_t t = 1; t < N; t++) {
      |                      ~~^~~
g++-14 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c quadratic.cpp -o quadratic.o
quadratic.cpp: In function 'void print_costf(std::vector<std::tuple<int, double, double, double, double, double> >&)':
quadratic.cpp:93:20: warning: unused variable 'q' [-Wunused-variable]
   93 |         for (auto& q: costS) {
      |                    ^
g++-14 -std=gnu++14 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o DeCAFS.so RcppExports.o algorithms.o fpop.o fpopmain.o quadratic.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/DeCAFS/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/DeCAFS/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/DeCAFS/src'
installing to /data/gannet/ripley/R/packages/tests-devel/DeCAFS.Rcheck/00LOCK-DeCAFS/00new/DeCAFS/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DeCAFS)