* installing *source* package ‘CARBayesST’ ...
** this is package ‘CARBayesST’ version ‘4.0’
** package ‘CARBayesST’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/CARBayesST/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CARBayesST.cpp -o CARBayesST.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
CARBayesST.cpp: In function ‘Rcpp::List SPTICARphiVarb(Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, double, Rcpp::NumericVector, Rcpp::NumericVector, double, double, Rcpp::NumericVector)’:
CARBayesST.cpp:4525:41: warning: ‘priormean’ may be used uninitialized [-Wmaybe-uninitialized]
 4525 |       newpriorbit = (0.5/priorvar) * pow(propphiVarb - priormean, 2);
      |                                      ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
CARBayesST.cpp:4473:25: note: ‘priormean’ was declared here
 4473 |   double priorvardenom, priormean;
      |                         ^~~~~~~~~
CARBayesST.cpp:4524:26: warning: ‘priorvar’ may be used uninitialized [-Wmaybe-uninitialized]
 4524 |       propphiVarb = rnorm(1, phiVarb[n], sqrt(priorvar*phiVarb_tune))[0];
      |                     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CARBayesST.cpp:4474:10: note: ‘priorvar’ was declared here
 4474 |   double priorvar;
      |          ^~~~~~~~
CARBayesST.cpp: In function ‘Rcpp::List SPTICARphiBinomial(Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, double, Rcpp::NumericVector, double, Rcpp::NumericVector, double, Rcpp::NumericVector)’:
CARBayesST.cpp:4431:101: warning: ‘priormean’ may be used uninitialized [-Wmaybe-uninitialized]
 4431 |       l_prob_old   = -y[n]*log(theta) + (trials[n] - y[n])*log(1 - (1/theta)) - (0.5/priorvar) * pow(phiVarb[n] - priormean, 2);
      |                                                                                                  ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
CARBayesST.cpp:4377:10: note: ‘priormean’ was declared here
 4377 |   double priormean;
      |          ^~~~~~~~~
CARBayesST.cpp:4428:27: warning: ‘priorvar’ may be used uninitialized [-Wmaybe-uninitialized]
 4428 |       phi_new      = rnorm(1, phiVarb[n], sqrt(priorvar*phiVarb_tune))[0];
      |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CARBayesST.cpp:4378:10: note: ‘priorvar’ was declared here
 4378 |   double priorvar;
      |          ^~~~~~~~
CARBayesST.cpp: In function ‘Rcpp::List SPTICARphiGaussian(Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, double, double, Rcpp::NumericVector, double, Rcpp::NumericVector)’:
CARBayesST.cpp:4181:32: warning: ‘priormean’ may be used uninitialized [-Wmaybe-uninitialized]
 4181 |       meanFullCon = ((priormean/priorvar) + (y[n] - XB[n])/lik_var)*varFullCon;
      |                      ~~~~~~~~~~^~~~~~~~~~
CARBayesST.cpp:4132:10: note: ‘priormean’ was declared here
 4132 |   double priormean;
      |          ^~~~~~~~~
CARBayesST.cpp:4181:32: warning: ‘priorvar’ may be used uninitialized [-Wmaybe-uninitialized]
 4181 |       meanFullCon = ((priormean/priorvar) + (y[n] - XB[n])/lik_var)*varFullCon;
      |                      ~~~~~~~~~~^~~~~~~~~~
CARBayesST.cpp:4133:10: note: ‘priorvar’ was declared here
 4133 |   double priorvar;
      |          ^~~~~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o CARBayesST.so CARBayesST.o RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/CARBayesST/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/CARBayesST/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/CARBayesST/src'
installing to /data/gannet/ripley/R/packages/tests-devel/CARBayesST.Rcheck/00LOCK-CARBayesST/00new/CARBayesST/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CARBayesST)