* installing *source* package ‘BayesPPDSurv’ ...
** package ‘BayesPPDSurv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BayesPPDSurv/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c phm_fixed.cpp -o phm_fixed.o
phm_fixed.cpp: In function 'Rcpp::List phm_fixed_a0(Rcpp::List&, Rcpp::List&, arma::vec&, arma::vec&, bool&, int, std::string, arma::vec, arma::vec, std::string, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, int, int, bool)':
phm_fixed.cpp:385:22: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
  385 |     for(int s = 0; s < n_intervals0.size(); s++){
      |                    ~~^~~~~~~~~~~~~~~~~~~~~
phm_fixed.cpp:398:24: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
  398 |       for(int s = 0; s < n_intervals0.size(); s++){
      |                      ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c phm_random.cpp -o phm_random.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c phm_random_prior.cpp -o phm_random_prior.o
phm_random.cpp: In function 'Rcpp::List phm_random_a0(Rcpp::List&, Rcpp::List&, arma::vec&, int, Rcpp::List&, arma::vec, arma::vec, arma::vec&, arma::vec&, arma::vec&, int, int)':
phm_random.cpp:345:22: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
  345 |     for(int s = 0; s < n_intervals0.size(); s++){
      |                    ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o BayesPPDSurv.so RcppExports.o phm_fixed.o phm_random.o phm_random_prior.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BayesPPDSurv/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BayesPPDSurv/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BayesPPDSurv/src'
installing to /data/gannet/ripley/R/packages/tests-devel/BayesPPDSurv.Rcheck/00LOCK-BayesPPDSurv/00new/BayesPPDSurv/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BayesPPDSurv)