* installing *source* package ‘Apoderoides’ ...
** package ‘Apoderoides’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Apoderoides/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c source.cpp -o source.o
In file included from /usr/local/gcc14/include/c++/14.2.0/bits/specfun.h:43,
                 from /usr/local/gcc14/include/c++/14.2.0/cmath:3898,
                 from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:100,
                 from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:66,
                 from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
                 from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
                 from source.cpp:1:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const int; _Up = int; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const int*; _OI = int*]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_algobase.h:521:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const int*; _OI = int*]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_algobase.h:548:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const int*, vector<int> >; _OI = int*]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_algobase.h:555:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const int*, vector<int> >; _OI = int*]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_algobase.h:651:7,
    inlined from 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const int*, std::vector<int> >; _ForwardIterator = int*]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_uninitialized.h:147:27,
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const int*, vector<int> >; _ForwardIterator = int*]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const int*, vector<int> >; _ForwardIterator = int*; _Tp = int]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_uninitialized.h:373:37,
    inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = int; _Alloc = std::allocator<int>]' at /usr/local/gcc14/include/c++/14.2.0/bits/stl_vector.h:606:31,
    inlined from 'std::vector<double> getRankCentroid_C(std::string, std::vector<int>, std::vector<std::__cxx11::basic_string<char> >, std::vector<int>, std::vector<int>, std::vector<std::__cxx11::basic_string<char> >, bool, int)' at source.cpp:280:32:
/usr/local/gcc14/include/c++/14.2.0/bits/stl_algobase.h:452:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 4 is out of the bounds [0, 4] [-Warray-bounds=]
  452 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o Apoderoides.so RcppExports.o source.o -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Apoderoides/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Apoderoides/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Apoderoides/src'
installing to /data/gannet/ripley/R/packages/tests-devel/Apoderoides.Rcheck/00LOCK-Apoderoides/00new/Apoderoides/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Apoderoides)