* installing *source* package ‘zoomerjoin’ ... ** package ‘zoomerjoin’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 19.1.5’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src' rm -Rf zoomerjoin.so ./rust/target/release/libzoomerjoin.a entrypoint.o /data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/.cargo /data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/vendor /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c entrypoint.c -o entrypoint.o if [ -f ./rust/vendor.tar.xz ]; then \ tar xf rust/vendor.tar.xz && \ mkdir -p /data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/.cargo && \ cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/.cargo/config.toml; \ fi # In some environments, ~/.cargo/bin might not be included in PATH, so we need # to set it here to ensure cargo can be invoked. It is appended to PATH and # therefore is only used if cargo is absent from the user's PATH. if [ "" != "true" ]; then \ export CARGO_HOME=/data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/.cargo; \ fi && \ export PATH="/usr/local/clang/bin:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:.:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \ echo `cargo --version` && echo `rustc --version` && \ cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target; cargo 1.69.0 rustc 1.69.0 (84c898d65 2023-04-16) (Fedora 1.69.0-1.fc36) Compiling autocfg v1.1.0 Compiling cfg-if v1.0.0 Compiling libc v0.2.151 Compiling scopeguard v1.2.0 Compiling memoffset v0.9.0 Compiling libm v0.2.8 Compiling crossbeam-utils v0.8.16 Compiling num-traits v0.2.17 Compiling crossbeam-epoch v0.9.15 Compiling proc-macro2 v1.0.70 Compiling rayon-core v1.12.0 Compiling crossbeam-deque v0.8.3 Compiling getrandom v0.2.11 Compiling matrixmultiply v0.3.8 Compiling num-integer v0.1.45 Compiling unicode-ident v1.0.12 Compiling either v1.9.0 Compiling rand_core v0.6.4 Compiling libR-sys v0.7.0 Compiling rawpointer v0.2.1 Compiling ppv-lite86 v0.2.17 Compiling rand_chacha v0.3.1 Compiling rayon v1.8.0 Compiling quote v1.0.33 Compiling num-complex v0.4.4 Compiling lock_api v0.4.11 Compiling parking_lot_core v0.9.9 Compiling paste v1.0.14 Compiling ndarray v0.15.6 Compiling syn v2.0.41 Compiling rand v0.8.5 Compiling extendr-api v0.7.0 Compiling once_cell v1.19.0 Compiling smallvec v1.11.2 Compiling extendr-macros v0.7.0 Compiling rand_distr v0.4.3 Compiling hashbrown v0.14.3 Compiling dashmap v5.5.3 Compiling ndarray-rand v0.14.0 Compiling itertools v0.10.5 Compiling nohash-hasher v0.2.0 Compiling rustc-hash v1.1.0 Compiling zoomerjoin v0.1.0 (/data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/rust) Finished release [optimized] target(s) in 2m 13s rm -Rf /data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/.cargo /data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src/vendor ./rust/target/release/build; \ /usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o zoomerjoin.so entrypoint.o -L./rust/target/release -lzoomerjoin make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/zoomerjoin/src' installing to /data/gannet/ripley/R/packages/tests-clang/zoomerjoin.Rcheck/00LOCK-zoomerjoin/00new/zoomerjoin/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (zoomerjoin)