* installing *source* package ‘xml2’ ...
** package ‘xml2’ successfully unpacked and MD5 sums checked
** using staged installation
Found pkg-config cflags and libs!
Using PKG_CFLAGS=-I/usr/include/libxml2
Using PKG_LIBS=-lxml2 -lz -llzma -lm
** libs
using C compiler: ‘clang version 19.1.5’
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/xml2/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c connection.cpp -o connection.o
connection.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_doc.cpp -o xml2_doc.o
xml2_doc.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_init.cpp -o xml2_init.o
xml2_init.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_namespace.cpp -o xml2_namespace.o
xml2_namespace.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_node.cpp -o xml2_node.o
xml2_node.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_output.cpp -o xml2_output.o
xml2_output.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_schema.cpp -o xml2_schema.o
xml2_schema.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_url.cpp -o xml2_url.o
xml2_url.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fvisibility=hidden -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c xml2_xpath.cpp -o xml2_xpath.o
xml2_xpath.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
1 | #define R_NO_REMAP
| ^
<command line>:4:9: note: previous definition is here
4 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -lz -llzma -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/xml2/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/xml2/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/xml2/src'
installing to /data/gannet/ripley/R/packages/tests-clang/xml2.Rcheck/00LOCK-xml2/00new/xml2/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (xml2)