* installing *source* package ‘vol2birdR’ ...
** package ‘vol2birdR’ successfully unpacked and MD5 sums checked
** using staged installation
checking for a sed that does not truncate output... /usr/bin/sed
checking for gawk... gawk
checking for grep that handles long lines and -e... /usr/bin/grep
checking for gcc... /usr/local/clang19/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang19/bin/clang accepts -g... yes
checking for /usr/local/clang19/bin/clang option to enable C11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for h5cc... /usr/bin/h5cc
checking for HDF5 libraries... yes (version 1.12.1)
checking for hdf5.h... yes
checking for H5Fcreate in -lhdf5... yes
checking for hdf5_hl.h... yes
checking for H5LTpath_valid in -lhdf5_hl... yes
checking for main in -lhdf5_hl... yes
checking for matching HDF5 Fortran wrapper... /usr/bin/h5fc
Found hdf5 with version: 1.12.1
checking for pkg-config... yes
checking for proj CFLAGS... -I/usr/local/include
checking for proj LDFLAGS... -L/usr/local/lib64
checking for proj LIBS... -lproj
checking for proj.h... yes
checking for proj_trans in -lproj... yes
checking If PROJ could be identified... Yes
configure: PROJ variant: 6
configure: PROJ cflags: -I/usr/local/include
configure: PROJ ldflags: -L/usr/local/lib64
configure: PROJ libs: -lproj
VOL2BIRD_CPPFLAGS= -I/usr/local/include -I/usr/include
VOL2BIRD_LIBS=-L/usr/lib64 -L/usr/local/lib64 -lproj -lhdf5 -lsz -lz -ldl -lm -lz -lm
checking if iris2odim support can be enabled... no
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘clang version 19.1.3’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/vol2birdR/src'
The name of the shared library to be created is: vol2birdR.so
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RaveIO.cpp -o RaveIO.o
RaveIO.cpp:934:9: warning: unused variable 'initSuccessful' [-Wunused-variable]
934 | int initSuccessful = 0;
| ^~~~~~~~~~~~~~
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c mistnet.cpp -o mistnet.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libvol2bird/libdealias.c -o libvol2bird/libdealias.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libvol2bird/librender.c -o libvol2bird/librender.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libvol2bird/librsl.c -o libvol2bird/librsl.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libvol2bird/libsvdfit.c -o libvol2bird/libsvdfit.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libvol2bird/libvol2bird.c -o libvol2bird/libvol2bird.o
libvol2bird/libvol2bird.c:331:12: warning: variable 'dbz' set but not used [-Wunused-but-set-variable]
331 | double dbz;
| ^
libvol2bird/libvol2bird.c:3297:17: warning: variable 'source' set but not used [-Wunused-but-set-variable]
3297 | const char *source, *date, *time;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/area.c -o librave/area.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/bitmap_generator.c -o librave/bitmap_generator.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/cartesian.c -o librave/cartesian.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/cartesian_odim_io.c -o librave/cartesian_odim_io.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/cartesiancomposite.c -o librave/cartesiancomposite.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/cartesianparam.c -o librave/cartesianparam.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/cartesianvolume.c -o librave/cartesianvolume.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/composite.c -o librave/composite.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/ctfilter.c -o librave/ctfilter.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/dealias.c -o librave/dealias.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/detection_range.c -o librave/detection_range.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/lazy_dataset.c -o librave/lazy_dataset.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/lazy_nodelist_reader.c -o librave/lazy_nodelist_reader.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/odc_hac.c -o librave/odc_hac.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/odim_io_utilities.c -o librave/odim_io_utilities.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/polar.c -o librave/polar.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/polar_odim_io.c -o librave/polar_odim_io.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/polarnav.c -o librave/polarnav.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/polarscan.c -o librave/polarscan.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/polarscanparam.c -o librave/polarscanparam.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/polarvolume.c -o librave/polarvolume.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/poo_composite_algorithm.c -o librave/poo_composite_algorithm.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/proj_wkt_helper.c -o librave/proj_wkt_helper.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/projection.c -o librave/projection.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/projection_pipeline.c -o librave/projection_pipeline.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/radardefinition.c -o librave/radardefinition.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_acrr.c -o librave/rave_acrr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_alloc.c -o librave/rave_alloc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_attribute.c -o librave/rave_attribute.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_attribute_table.c -o librave/rave_attribute_table.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_data2d.c -o librave/rave_data2d.o
librave/rave_data2d.c:394:13: warning: implicit conversion from 'long' to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
394 | if (v > LONG_MAX)
| ~ ^~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:51:19: note: expanded from macro 'LONG_MAX'
51 | #define LONG_MAX __LONG_MAX__
| ^~~~~~~~~~~~
<built-in>:61:22: note: expanded from macro '__LONG_MAX__'
61 | #define __LONG_MAX__ 9223372036854775807L
| ^~~~~~~~~~~~~~~~~~~~
librave/rave_data2d.c:395:11: warning: implicit conversion from 'long' to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
395 | v = LONG_MAX;
| ~ ^~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:51:19: note: expanded from macro 'LONG_MAX'
51 | #define LONG_MAX __LONG_MAX__
| ^~~~~~~~~~~~
<built-in>:61:22: note: expanded from macro '__LONG_MAX__'
61 | #define __LONG_MAX__ 9223372036854775807L
| ^~~~~~~~~~~~~~~~~~~~
librave/rave_data2d.c:406:13: warning: implicit conversion from 'unsigned long' to 'double' changes value from 18446744073709551615 to 18446744073709551616 [-Wimplicit-const-int-float-conversion]
406 | if (v > ULONG_MAX)
| ~ ^~~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:65:37: note: expanded from macro 'ULONG_MAX'
65 | #define ULONG_MAX (__LONG_MAX__ *2UL+1UL)
| ~~~~~~~~~~~~~~~~~^~~~
librave/rave_data2d.c:407:11: warning: implicit conversion from 'unsigned long' to 'double' changes value from 18446744073709551615 to 18446744073709551616 [-Wimplicit-const-int-float-conversion]
407 | v = ULONG_MAX;
| ~ ^~~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:65:37: note: expanded from macro 'ULONG_MAX'
65 | #define ULONG_MAX (__LONG_MAX__ *2UL+1UL)
| ~~~~~~~~~~~~~~~~~^~~~
4 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_datetime.c -o librave/rave_datetime.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_debug.c -o librave/rave_debug.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_field.c -o librave/rave_field.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_gra.c -o librave/rave_gra.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_hlhdf_utilities.c -o librave/rave_hlhdf_utilities.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_io.c -o librave/rave_io.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_list.c -o librave/rave_list.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_object.c -o librave/rave_object.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_qitotal.c -o librave/rave_qitotal.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_transform.c -o librave/rave_transform.o
librave/rave_transform.c:192:13: warning: implicit conversion from 'long' to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
192 | if (v > LONG_MAX)
| ~ ^~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:51:19: note: expanded from macro 'LONG_MAX'
51 | #define LONG_MAX __LONG_MAX__
| ^~~~~~~~~~~~
<built-in>:61:22: note: expanded from macro '__LONG_MAX__'
61 | #define __LONG_MAX__ 9223372036854775807L
| ^~~~~~~~~~~~~~~~~~~~
librave/rave_transform.c:193:11: warning: implicit conversion from 'long' to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
193 | v = LONG_MAX;
| ~ ^~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:51:19: note: expanded from macro 'LONG_MAX'
51 | #define LONG_MAX __LONG_MAX__
| ^~~~~~~~~~~~
<built-in>:61:22: note: expanded from macro '__LONG_MAX__'
61 | #define __LONG_MAX__ 9223372036854775807L
| ^~~~~~~~~~~~~~~~~~~~
librave/rave_transform.c:204:13: warning: implicit conversion from 'unsigned long' to 'double' changes value from 18446744073709551615 to 18446744073709551616 [-Wimplicit-const-int-float-conversion]
204 | if (v > ULONG_MAX)
| ~ ^~~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:65:37: note: expanded from macro 'ULONG_MAX'
65 | #define ULONG_MAX (__LONG_MAX__ *2UL+1UL)
| ~~~~~~~~~~~~~~~~~^~~~
librave/rave_transform.c:205:11: warning: implicit conversion from 'unsigned long' to 'double' changes value from 18446744073709551615 to 18446744073709551616 [-Wimplicit-const-int-float-conversion]
205 | v = ULONG_MAX;
| ~ ^~~~~~~~~
/usr/local/clang19/lib/clang/19/include/limits.h:65:37: note: expanded from macro 'ULONG_MAX'
65 | #define ULONG_MAX (__LONG_MAX__ *2UL+1UL)
| ~~~~~~~~~~~~~~~~~^~~~
4 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_types.c -o librave/rave_types.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/rave_utilities.c -o librave/rave_utilities.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/raveobject_hashtable.c -o librave/raveobject_hashtable.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/raveobject_list.c -o librave/raveobject_list.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/raveutil.c -o librave/raveutil.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/transform.c -o librave/transform.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/vertical_profile.c -o librave/vertical_profile.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librave/vp_odim_io.c -o librave/vp_odim_io.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf.c -o libhlhdf/hlhdf.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_alloc.c -o libhlhdf/hlhdf_alloc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_compound.c -o libhlhdf/hlhdf_compound.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_compound_utils.c -o libhlhdf/hlhdf_compound_utils.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_debug.c -o libhlhdf/hlhdf_debug.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_node.c -o libhlhdf/hlhdf_node.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_nodelist.c -o libhlhdf/hlhdf_nodelist.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_read.c -o libhlhdf/hlhdf_read.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libhlhdf/hlhdf_write.c -o libhlhdf/hlhdf_write.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/anyformat_to_radar.c -o librsl/anyformat_to_radar.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/endian.c -o librsl/endian.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/gzip.c -o librsl/gzip.o
librsl/gzip.c:132:7: warning: variable 'totallen' set but not used [-Wunused-but-set-variable]
132 | int totallen = 0;
| ^
librsl/gzip.c:159:1: warning: unused label 'done' [-Wunused-label]
159 | done:
| ^~~~~
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/prune.c -o librsl/prune.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/radar.c -o librsl/radar.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/rainbow.c -o librsl/rainbow.o
librsl/rainbow.c:161:10: warning: unused variable 'label' [-Wunused-variable]
161 | char label;
| ^~~~~
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/rainbow_to_radar.c -o librsl/rainbow_to_radar.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/range.c -o librsl/range.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/ray_indexes.c -o librsl/ray_indexes.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/sort_rays.c -o librsl/sort_rays.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/uf_to_radar.c -o librsl/uf_to_radar.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/volume.c -o librsl/volume.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/wsr88d.c -o librsl/wsr88d.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/wsr88d_get_site.c -o librsl/wsr88d_get_site.o
librsl/wsr88d_get_site.c:91:6: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
91 | for(i=0;i<15;i++)
| ^
librsl/wsr88d_get_site.c:89:9: note: previous statement is here
89 | for(i=0;i<4;i++)
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/wsr88d_m31.c -o librsl/wsr88d_m31.o
librsl/wsr88d_m31.c:395:20: warning: variable 'waveform' set but not used [-Wunused-but-set-variable]
395 | int vol_index, waveform;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/wsr88d_merge_split_cuts.c -o librsl/wsr88d_merge_split_cuts.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/wsr88d_remove_sails_sweep.c -o librsl/wsr88d_remove_sails_sweep.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/include -I/usr/include -DH5_USE_110_API -I. -I./includes -I./includes/libvol2bird -I./includes/libmistnet -I./includes/librave -I./includes/libhlhdf -I./includes/librsl -DNOCONFUSE -DMISTNET -DVOL2BIRD_R -DNO_VOL2BIRD_PRINTF -DNO_HLHDF_PRINTF -DNO_HLHDF_ABORT -DNO_RAVE_PRINTF -DNO_RAVE_ABORT -DNO_UNZIP_PIPE -DRSL_NO_STDERR_PRINTF -DRSL=1 -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppGSL/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c librsl/wsr88d_to_radar.c -o librsl/wsr88d_to_radar.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o vol2birdR.so ./RaveIO.o ./RcppExports.o ./mistnet.o ./libvol2bird/libdealias.o ./libvol2bird/librender.o ./libvol2bird/librsl.o ./libvol2bird/libsvdfit.o ./libvol2bird/libvol2bird.o ./librave/area.o ./librave/bitmap_generator.o ./librave/cartesian.o ./librave/cartesian_odim_io.o ./librave/cartesiancomposite.o ./librave/cartesianparam.o ./librave/cartesianvolume.o ./librave/composite.o ./librave/ctfilter.o ./librave/dealias.o ./librave/detection_range.o ./librave/lazy_dataset.o ./librave/lazy_nodelist_reader.o ./librave/odc_hac.o ./librave/odim_io_utilities.o ./librave/polar.o ./librave/polar_odim_io.o ./librave/polarnav.o ./librave/polarscan.o ./librave/polarscanparam.o ./librave/polarvolume.o ./librave/poo_composite_algorithm.o ./librave/proj_wkt_helper.o ./librave/projection.o ./librave/projection_pipeline.o ./librave/radardefinition.o ./librave/rave_acrr.o ./librave/rave_alloc.o ./librave/rave_attribute.o ./librave/rave_attribute_table.o ./librave/rave_data2d.o ./librave/rave_datetime.o ./librave/rave_debug.o ./librave/rave_field.o ./librave/rave_gra.o ./librave/rave_hlhdf_utilities.o ./librave/rave_io.o ./librave/rave_list.o ./librave/rave_object.o ./librave/rave_qitotal.o ./librave/rave_transform.o ./librave/rave_types.o ./librave/rave_utilities.o ./librave/raveobject_hashtable.o ./librave/raveobject_list.o ./librave/raveutil.o ./librave/transform.o ./librave/vertical_profile.o ./librave/vp_odim_io.o ./libhlhdf/hlhdf.o ./libhlhdf/hlhdf_alloc.o ./libhlhdf/hlhdf_compound.o ./libhlhdf/hlhdf_compound_utils.o ./libhlhdf/hlhdf_debug.o ./libhlhdf/hlhdf_node.o ./libhlhdf/hlhdf_nodelist.o ./libhlhdf/hlhdf_read.o ./libhlhdf/hlhdf_write.o ./librsl/anyformat_to_radar.o ./librsl/endian.o ./librsl/gzip.o ./librsl/prune.o ./librsl/radar.o ./librsl/rainbow.o ./librsl/rainbow_to_radar.o ./librsl/range.o ./librsl/ray_indexes.o ./librsl/sort_rays.o ./librsl/uf_to_radar.o ./librsl/volume.o ./librsl/wsr88d.o ./librsl/wsr88d_get_site.o ./librsl/wsr88d_m31.o ./librsl/wsr88d_merge_split_cuts.o ./librsl/wsr88d_remove_sails_sweep.o ./librsl/wsr88d_to_radar.o -L/usr/lib64 -L/usr/local/lib64 -lproj -lhdf5 -lsz -lz -ldl -lm -lz -lm -lgsl -lgslcblas -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/vol2birdR/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/vol2birdR/src'
The name of the shared library to be created is: vol2birdR.so
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/vol2birdR/src'
installing to /data/gannet/ripley/R/packages/tests-clang/vol2birdR.Rcheck/00LOCK-vol2birdR/00new/vol2birdR/libs
** R
** inst
** byte-compile and prepare package for lazy loading
in method for ‘show’ with signature ‘"Rcpp_Vol2BirdConfig"’: no definition for class “Rcpp_Vol2BirdConfig”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vol2birdR)