* installing *source* package ‘treestats’ ... ** package ‘treestats’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 19.1.6’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/treestats/src' /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c beta.cpp -o beta.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c brts.cpp -o brts.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c centralities.cpp -o centralities.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c colless.cpp -o colless.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c depth.cpp -o depth.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ladder.cpp -o ladder.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c laplacian.cpp -o laplacian.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c mpd.cpp -o mpd.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c phylo.cpp -o phylo.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/nloptr/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I../inst/include -I. -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c sackin.cpp -o sackin.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o treestats.so RcppExports.o beta.o brts.o centralities.o colless.o depth.o ladder.o laplacian.o mpd.o phylo.o sackin.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/treestats/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/treestats/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/treestats/src' installing to /data/gannet/ripley/R/packages/tests-clang/treestats.Rcheck/00LOCK-treestats/00new/treestats/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (treestats)