* installing *source* package ‘svines’ ... ** package ‘svines’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 19.1.6’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/svines/src' /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -pthread -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppThread/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/wdm/include' -I'/data/gannet/ripley/R/test-clang/rvinecopulib/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61: /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:4: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35: /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:4: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:4: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -pthread -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppThread/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/wdm/include' -I'/data/gannet/ripley/R/test-clang/rvinecopulib/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c wrappers_svine.cpp -o wrappers_svine.o In file included from RcppExports.cpp:5: In file included from /data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread.h:9: /data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 10 | #define R_NO_REMAP | ^ <command line>:2:9: note: previous definition is here 2 | #define R_NO_REMAP 1 | ^ 6 warnings generated. In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34: /data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21: /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131: /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28: /data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21: /data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from wrappers_svine.cpp:15: In file included from ../inst/include/svines.hpp:3: In file included from ../inst/include/svines/svinecop.hpp:3: In file included from ../inst/include/svines/svine_selector.hpp:3: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/class.hpp:196: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/vinecop/implementation/class.ipp:7: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:10: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_interface.hpp:15: In file included from /data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread.h:9: /data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 10 | #define R_NO_REMAP | ^ <command line>:2:9: note: previous definition is here 2 | #define R_NO_REMAP 1 | ^ In file included from wrappers_svine.cpp:16: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61: /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from wrappers_svine.cpp:16: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35: /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from wrappers_svine.cpp:16: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from wrappers_svine.cpp:16: In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 14 warnings generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o svines.so RcppExports.o wrappers_svine.o -latomic -lpthread make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/svines/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/svines/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/svines/src' installing to /data/gannet/ripley/R/packages/tests-clang/svines.Rcheck/00LOCK-svines/00new/svines/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (svines)