- using R Under development (unstable) (2025-02-15 r87725)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 19.1.7
flang-new version 19.1.7
- running under: Fedora Linux 40 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘stan4bart/DESCRIPTION’ ... OK
- this is package ‘stan4bart’ version ‘0.0-10’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘stan4bart’ can be installed ... [239s/357s] OK
See the install log for details.
- used C compiler: ‘clang version 19.1.7’
- used C++ compiler: ‘clang version 19.1.7’
- checking C++ specification ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [30s/30s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [12s/26s] ERROR
Running ‘testthat.R’ [12s/25s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> Sys.unsetenv("R_TESTS")
> if (require(testthat, quietly = TRUE)) {
+ require(stan4bart)
+ test_check("stan4bart")
+ } else {
+ cat("package 'testthat' not available; cannot run unit tests\n")
+ }
Loading required package: stan4bart
Loading required package: dbarts
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 205 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (4): 'test-01-continuous.R:124:3', 'test-01-continuous.R:163:3',
'test-02-binary.R:33:3', 'test-02-binary.R:128:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-01-continuous.R:277:3'): ppd has approximately right amount of noise ──
... <= 0.1 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 205 ]
Error: Test failures
Execution halted
- checking PDF version of manual ... OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR