* installing *source* package ‘speakeasyR’ ...
** package ‘speakeasyR’ successfully unpacked and MD5 sums checked
** using staged installation
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for gcc... /usr/local/clang19/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang19/bin/clang accepts -g... yes
checking for /usr/local/clang19/bin/clang option to enable C11 features... none needed
checking for a sed that does not truncate output... /usr/bin/sed
checking how to run the C preprocessor... /usr/local/clang19/bin/clang -E
checking for egrep -e... /usr/bin/grep -E
checking whether /usr/local/clang19/bin/clang is Clang... yes
checking whether pthreads work with "-pthread" and "-lpthread"... yes
checking whether Clang needs flag to prevent "argument unused" warning when linking with -pthread... no
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking whether more special flags are required for pthreads... no
checking for PTHREAD_PRIO_INHERIT... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for arpack... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/include/config.h
** libs
using C compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c speakeasyR.c -o speakeasyR.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_order_nodes.c -o se2/src/speakeasy2/se2_order_nodes.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_partitions.c -o se2/src/speakeasy2/se2_partitions.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_random.c -o se2/src/speakeasy2/se2_random.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_modes.c -o se2/src/speakeasy2/se2_modes.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_core.c -o se2/src/speakeasy2/se2_core.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_seeding.c -o se2/src/speakeasy2/se2_seeding.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_knn_graph.c -o se2/src/speakeasy2/se2_knn_graph.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_label.c -o se2/src/speakeasy2/se2_label.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_reweigh_graph.c -o se2/src/speakeasy2/se2_reweigh_graph.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/src/speakeasy2/se2_neighborlist.c -o se2/src/speakeasy2/se2_neighborlist.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/error.c -o se2/vendor/igraph/src/core/error.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/indheap.c -o se2/vendor/igraph/src/core/indheap.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/interruption.c -o se2/vendor/igraph/src/core/interruption.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/matrix.c -o se2/vendor/igraph/src/core/matrix.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/memory.c -o se2/vendor/igraph/src/core/memory.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/printing.c -o se2/vendor/igraph/src/core/printing.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/sparsemat.c -o se2/vendor/igraph/src/core/sparsemat.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/statusbar.c -o se2/vendor/igraph/src/core/statusbar.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/vector.c -o se2/vendor/igraph/src/core/vector.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/vector_list.c -o se2/vendor/igraph/src/core/vector_list.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/core/vector_ptr.c -o se2/vendor/igraph/src/core/vector_ptr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/graph/attributes.c -o se2/vendor/igraph/src/graph/attributes.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/graph/caching.c -o se2/vendor/igraph/src/graph/caching.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/graph/iterators.c -o se2/vendor/igraph/src/graph/iterators.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/graph/type_common.c -o se2/vendor/igraph/src/graph/type_common.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/graph/type_indexededgelist.c -o se2/vendor/igraph/src/graph/type_indexededgelist.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/internal/hacks.c -o se2/vendor/igraph/src/internal/hacks.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/internal/qsort.c -o se2/vendor/igraph/src/internal/qsort.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/internal/qsort_r.c -o se2/vendor/igraph/src/internal/qsort_r.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/math/complex.c -o se2/vendor/igraph/src/math/complex.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/math/utils.c -o se2/vendor/igraph/src/math/utils.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/properties/degrees.c -o se2/vendor/igraph/src/properties/degrees.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/constructors/basic_constructors.c -o se2/vendor/igraph/src/constructors/basic_constructors.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/community/community_misc.c -o se2/vendor/igraph/src/community/community_misc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/linalg/arpack.c -o se2/vendor/igraph/src/linalg/arpack.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/random/random.c -o se2/vendor/igraph/src/random/random.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/random/rng_glibc2.c -o se2/vendor/igraph/src/random/rng_glibc2.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/random/rng_pcg64.c -o se2/vendor/igraph/src/random/rng_pcg64.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/random/rng_mt19937.c -o se2/vendor/igraph/src/random/rng_mt19937.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/src/random/rng_pcg32.c -o se2/vendor/igraph/src/random/rng_pcg32.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_cumsum.c -o se2/vendor/igraph/vendor/cs/cs_cumsum.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_reach.c -o se2/vendor/igraph/vendor/cs/cs_reach.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_qr.c -o se2/vendor/igraph/vendor/cs/cs_qr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_droptol.c -o se2/vendor/igraph/vendor/cs/cs_droptol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_norm.c -o se2/vendor/igraph/vendor/cs/cs_norm.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_maxtrans.c -o se2/vendor/igraph/vendor/cs/cs_maxtrans.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_entry.c -o se2/vendor/igraph/vendor/cs/cs_entry.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_spsolve.c -o se2/vendor/igraph/vendor/cs/cs_spsolve.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_dropzeros.c -o se2/vendor/igraph/vendor/cs/cs_dropzeros.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_compress.c -o se2/vendor/igraph/vendor/cs/cs_compress.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_permute.c -o se2/vendor/igraph/vendor/cs/cs_permute.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_utsolve.c -o se2/vendor/igraph/vendor/cs/cs_utsolve.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_malloc.c -o se2/vendor/igraph/vendor/cs/cs_malloc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_amd.c -o se2/vendor/igraph/vendor/cs/cs_amd.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_pinv.c -o se2/vendor/igraph/vendor/cs/cs_pinv.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_house.c -o se2/vendor/igraph/vendor/cs/cs_house.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_util.c -o se2/vendor/igraph/vendor/cs/cs_util.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_scc.c -o se2/vendor/igraph/vendor/cs/cs_scc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_happly.c -o se2/vendor/igraph/vendor/cs/cs_happly.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_ereach.c -o se2/vendor/igraph/vendor/cs/cs_ereach.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_tdfs.c -o se2/vendor/igraph/vendor/cs/cs_tdfs.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_add.c -o se2/vendor/igraph/vendor/cs/cs_add.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_counts.c -o se2/vendor/igraph/vendor/cs/cs_counts.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_qrsol.c -o se2/vendor/igraph/vendor/cs/cs_qrsol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_updown.c -o se2/vendor/igraph/vendor/cs/cs_updown.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_leaf.c -o se2/vendor/igraph/vendor/cs/cs_leaf.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_post.c -o se2/vendor/igraph/vendor/cs/cs_post.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_load.c -o se2/vendor/igraph/vendor/cs/cs_load.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_lu.c -o se2/vendor/igraph/vendor/cs/cs_lu.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_pvec.c -o se2/vendor/igraph/vendor/cs/cs_pvec.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_ltsolve.c -o se2/vendor/igraph/vendor/cs/cs_ltsolve.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_symperm.c -o se2/vendor/igraph/vendor/cs/cs_symperm.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_dupl.c -o se2/vendor/igraph/vendor/cs/cs_dupl.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_etree.c -o se2/vendor/igraph/vendor/cs/cs_etree.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_ipvec.c -o se2/vendor/igraph/vendor/cs/cs_ipvec.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_dmperm.c -o se2/vendor/igraph/vendor/cs/cs_dmperm.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_lsolve.c -o se2/vendor/igraph/vendor/cs/cs_lsolve.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_sqr.c -o se2/vendor/igraph/vendor/cs/cs_sqr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_print.c -o se2/vendor/igraph/vendor/cs/cs_print.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_multiply.c -o se2/vendor/igraph/vendor/cs/cs_multiply.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_chol.c -o se2/vendor/igraph/vendor/cs/cs_chol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_cholsol.c -o se2/vendor/igraph/vendor/cs/cs_cholsol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_lusol.c -o se2/vendor/igraph/vendor/cs/cs_lusol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_fkeep.c -o se2/vendor/igraph/vendor/cs/cs_fkeep.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_gaxpy.c -o se2/vendor/igraph/vendor/cs/cs_gaxpy.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_randperm.c -o se2/vendor/igraph/vendor/cs/cs_randperm.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_schol.c -o se2/vendor/igraph/vendor/cs/cs_schol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_dfs.c -o se2/vendor/igraph/vendor/cs/cs_dfs.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_usolve.c -o se2/vendor/igraph/vendor/cs/cs_usolve.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_transpose.c -o se2/vendor/igraph/vendor/cs/cs_transpose.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/cs/cs_scatter.c -o se2/vendor/igraph/vendor/cs/cs_scatter.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-output-64.c -o se2/vendor/igraph/vendor/pcg/pcg-output-64.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-advance-128.c -o se2/vendor/igraph/vendor/pcg/pcg-advance-128.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-output-128.c -o se2/vendor/igraph/vendor/pcg/pcg-output-128.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-advance-64.c -o se2/vendor/igraph/vendor/pcg/pcg-advance-64.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-rngs-128.c -o se2/vendor/igraph/vendor/pcg/pcg-rngs-128.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-output-32.c -o se2/vendor/igraph/vendor/pcg/pcg-output-32.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DUSING_R -DSE2PAR  -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/include" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/src" -I"/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src/se2/vendor/igraph/vendor" -I/usr/include/arpack  -isystem /usr/local/clang19/include -I/usr/local/clang/include  -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fvisibility=hidden  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c se2/vendor/igraph/vendor/pcg/pcg-rngs-64.c -o se2/vendor/igraph/vendor/pcg/pcg-rngs-64.o
/usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o speakeasyR.so speakeasyR.o ./se2/src/speakeasy2/se2_order_nodes.o ./se2/src/speakeasy2/se2_partitions.o ./se2/src/speakeasy2/se2_random.o ./se2/src/speakeasy2/se2_modes.o ./se2/src/speakeasy2/se2_core.o ./se2/src/speakeasy2/se2_seeding.o ./se2/src/speakeasy2/se2_knn_graph.o ./se2/src/speakeasy2/se2_label.o ./se2/src/speakeasy2/se2_reweigh_graph.o ./se2/src/speakeasy2/se2_neighborlist.o ./se2/vendor/igraph/src/core/error.o ./se2/vendor/igraph/src/core/indheap.o ./se2/vendor/igraph/src/core/interruption.o ./se2/vendor/igraph/src/core/matrix.o ./se2/vendor/igraph/src/core/memory.o ./se2/vendor/igraph/src/core/printing.o ./se2/vendor/igraph/src/core/sparsemat.o ./se2/vendor/igraph/src/core/statusbar.o ./se2/vendor/igraph/src/core/vector.o ./se2/vendor/igraph/src/core/vector_list.o ./se2/vendor/igraph/src/core/vector_ptr.o ./se2/vendor/igraph/src/graph/attributes.o ./se2/vendor/igraph/src/graph/caching.o ./se2/vendor/igraph/src/graph/iterators.o ./se2/vendor/igraph/src/graph/type_common.o ./se2/vendor/igraph/src/graph/type_indexededgelist.o ./se2/vendor/igraph/src/internal/hacks.o ./se2/vendor/igraph/src/internal/qsort.o ./se2/vendor/igraph/src/internal/qsort_r.o ./se2/vendor/igraph/src/math/complex.o ./se2/vendor/igraph/src/math/utils.o ./se2/vendor/igraph/src/properties/degrees.o ./se2/vendor/igraph/src/constructors/basic_constructors.o ./se2/vendor/igraph/src/community/community_misc.o ./se2/vendor/igraph/src/linalg/arpack.o ./se2/vendor/igraph/src/random/random.o ./se2/vendor/igraph/src/random/rng_glibc2.o ./se2/vendor/igraph/src/random/rng_pcg64.o ./se2/vendor/igraph/src/random/rng_mt19937.o ./se2/vendor/igraph/src/random/rng_pcg32.o ./se2/vendor/igraph/vendor/cs/cs_cumsum.o ./se2/vendor/igraph/vendor/cs/cs_reach.o ./se2/vendor/igraph/vendor/cs/cs_qr.o ./se2/vendor/igraph/vendor/cs/cs_droptol.o ./se2/vendor/igraph/vendor/cs/cs_norm.o ./se2/vendor/igraph/vendor/cs/cs_maxtrans.o ./se2/vendor/igraph/vendor/cs/cs_entry.o ./se2/vendor/igraph/vendor/cs/cs_spsolve.o ./se2/vendor/igraph/vendor/cs/cs_dropzeros.o ./se2/vendor/igraph/vendor/cs/cs_compress.o ./se2/vendor/igraph/vendor/cs/cs_permute.o ./se2/vendor/igraph/vendor/cs/cs_utsolve.o ./se2/vendor/igraph/vendor/cs/cs_malloc.o ./se2/vendor/igraph/vendor/cs/cs_amd.o ./se2/vendor/igraph/vendor/cs/cs_pinv.o ./se2/vendor/igraph/vendor/cs/cs_house.o ./se2/vendor/igraph/vendor/cs/cs_util.o ./se2/vendor/igraph/vendor/cs/cs_scc.o ./se2/vendor/igraph/vendor/cs/cs_happly.o ./se2/vendor/igraph/vendor/cs/cs_ereach.o ./se2/vendor/igraph/vendor/cs/cs_tdfs.o ./se2/vendor/igraph/vendor/cs/cs_add.o ./se2/vendor/igraph/vendor/cs/cs_counts.o ./se2/vendor/igraph/vendor/cs/cs_qrsol.o ./se2/vendor/igraph/vendor/cs/cs_updown.o ./se2/vendor/igraph/vendor/cs/cs_leaf.o ./se2/vendor/igraph/vendor/cs/cs_post.o ./se2/vendor/igraph/vendor/cs/cs_load.o ./se2/vendor/igraph/vendor/cs/cs_lu.o ./se2/vendor/igraph/vendor/cs/cs_pvec.o ./se2/vendor/igraph/vendor/cs/cs_ltsolve.o ./se2/vendor/igraph/vendor/cs/cs_symperm.o ./se2/vendor/igraph/vendor/cs/cs_dupl.o ./se2/vendor/igraph/vendor/cs/cs_etree.o ./se2/vendor/igraph/vendor/cs/cs_ipvec.o ./se2/vendor/igraph/vendor/cs/cs_dmperm.o ./se2/vendor/igraph/vendor/cs/cs_lsolve.o ./se2/vendor/igraph/vendor/cs/cs_sqr.o ./se2/vendor/igraph/vendor/cs/cs_print.o ./se2/vendor/igraph/vendor/cs/cs_multiply.o ./se2/vendor/igraph/vendor/cs/cs_chol.o ./se2/vendor/igraph/vendor/cs/cs_cholsol.o ./se2/vendor/igraph/vendor/cs/cs_lusol.o ./se2/vendor/igraph/vendor/cs/cs_fkeep.o ./se2/vendor/igraph/vendor/cs/cs_gaxpy.o ./se2/vendor/igraph/vendor/cs/cs_randperm.o ./se2/vendor/igraph/vendor/cs/cs_schol.o ./se2/vendor/igraph/vendor/cs/cs_dfs.o ./se2/vendor/igraph/vendor/cs/cs_usolve.o ./se2/vendor/igraph/vendor/cs/cs_transpose.o ./se2/vendor/igraph/vendor/cs/cs_scatter.o ./se2/vendor/igraph/vendor/pcg/pcg-output-64.o ./se2/vendor/igraph/vendor/pcg/pcg-advance-128.o ./se2/vendor/igraph/vendor/pcg/pcg-output-128.o ./se2/vendor/igraph/vendor/pcg/pcg-advance-64.o ./se2/vendor/igraph/vendor/pcg/pcg-rngs-128.o ./se2/vendor/igraph/vendor/pcg/pcg-output-32.o ./se2/vendor/igraph/vendor/pcg/pcg-rngs-64.o -lpthread -lm -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm -larpack -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64
rm -f *__genmod.f90
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/speakeasyR/src'
installing to /data/gannet/ripley/R/packages/tests-clang/speakeasyR.Rcheck/00LOCK-speakeasyR/00new/speakeasyR/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (speakeasyR)