• using R Under development (unstable) (2025-02-18 r87745)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 20.1.0-rc2     flang version 20.1.0-rc2
• running under: Fedora Linux 40 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘sf/DESCRIPTION’ ... OK
• this is package ‘sf’ version ‘1.0-19’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘sf’ can be installed ... [261s/252s] OK See the install log for details.
• used C++ compiler: ‘clang version 20.1.0-rc2’
• checking installed package size ... INFO   installed size is 7.8Mb   sub-directories of 1Mb or more:     doc 1.8Mb     libs 1.2Mb     sqlite 1.5Mb
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... NOTE   possible bashism in configure.ac line 25 (test -a/-o):       if test [$RVER_MAJOR -lt 3] -o [$RVER_MAJOR -eq 3 -a $RVER_MINOR -lt 3]; then   possible bashism in configure.ac line 120 (test -a/-o):   if test [${GDAL_MAJ_VER} -eq 3] -a [${GDAL_MIN_VER} -eq 6] -a [${GDAL_PATCH_VER} -eq 0] ; then
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [61s/83s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [36s/49s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [213s/499s] NOTE   Running ‘aggregate.R’   Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ... OK   Running ‘cast.R’   Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK   Running ‘crs.R’   Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ... OK   Running ‘dist.R’   Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK   Running ‘dplyr.R’   Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ... OK   Running ‘empty.R’   Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK   Running ‘full.R’   Comparing ‘full.Rout’ to ‘full.Rout.save’ ...54c54 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 63c63 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 80c80 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 89c89 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 102c102 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84)   Running ‘gdal_geom.R’   Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...243,247c243,247 < [1,] 1760242094 0.114 < [2,] 946426033 0.061 < [3,] 2202239126 0.143 < [4,] 1074338664 0.070 < [5,] 2352518951 0.153 --- > [1,] 1760230516 0.114 > [2,] 946417787 0.061 > [3,] 2202223078 0.143 > [4,] 1074332698 0.070 > [5,] 2352528086 0.153   Running ‘geos.R’ [53s/128s]   Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ...13,22c13,22 < [1,] 0.00 0.00 25652.42 440561.04 299772.09 361529.39 419671.11 < [2,] 0.00 0.00 0.00 409428.55 268944.32 332589.77 388544.57 < [3,] 25652.42 0.00 0.00 367555.46 227017.50 290297.11 346667.96 < [4,] 440561.04 409428.55 367555.46 0.00 67226.88 45537.78 0.00 < [5,] 299772.09 268944.32 227017.50 67226.88 0.00 0.00 46527.48 < [6,] 361529.39 332589.77 290297.11 45537.78 0.00 0.00 30213.34 < [7,] 419671.11 388544.57 346667.96 0.00 46527.48 30213.34 0.00 < [8,] 384592.69 354294.05 312350.59 16130.19 11926.78 0.00 0.00 < [9,] 262354.14 231217.46 189310.29 140455.85 0.00 64606.20 119563.76 < [10,] 71139.12 41943.86 0.00 330751.41 190182.42 252372.08 309862.03 --- > [1,] 0.00 0.00 25651.99 440561.48 299772.34 361529.73 419671.66 > [2,] 0.00 0.00 0.00 409429.44 268945.05 332590.52 388545.58 > [3,] 25651.99 0.00 0.00 367556.52 227018.38 290298.04 346669.14 > [4,] 440561.48 409429.44 367556.52 0.00 67226.86 45537.62 0.00 > [5,] 299772.34 268945.05 227018.38 67226.86 0.00 0.00 46527.56 > [6,] 361529.73 332590.52 290298.04 45537.62 0.00 0.00 30213.17 > [7,] 419671.66 388545.58 346669.14 0.00 46527.56 30213.17 0.00 > [8,] 384593.29 354295.06 312351.76 16130.19 11926.86 0.00 0.00 > [9,] 262353.97 231217.73 189310.73 140455.97 0.00 64606.27 119564.00 > [10,] 71138.53 41943.71 0.00 330752.58 190183.42 252373.26 309863.33 24,33c24,33 < [1,] 384592.69 262354.14 71139.12 < [2,] 354294.05 231217.46 41943.86 < [3,] 312350.59 189310.29 0.00 < [4,] 16130.19 140455.85 330751.41 < [5,] 11926.78 0.00 190182.42 < [6,] 0.00 64606.20 252372.08 < [7,] 0.00 119563.76 309862.03 < [8,] 0.00 85533.06 275389.73 < [9,] 85533.06 0.00 152488.90 < [10,] 275389.73 152488.90 0.00 --- > [1,] 384593.29 262353.97 71138.53 > [2,] 354295.06 231217.73 41943.71 > [3,] 312351.76 189310.73 0.00 > [4,] 16130.19 140455.97 330752.58 > [5,] 11926.86 0.00 190183.42 > [6,] 0.00 64606.27 252373.26 > [7,] 0.00 119564.00 309863.33 > [8,] 0.00 85533.33 275391.07 > [9,] 85533.33 0.00 152489.45 > [10,] 275391.07 152489.45 0.00   Running ‘graticule.R’ [6s/17s]   Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK   Running ‘grid.R’   Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK   Running ‘maps.R’ [4s/10s]   Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK   Running ‘plot.R’ [16s/43s]   Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK   Running ‘read.R’ [5s/17s]   Comparing ‘read.Rout’ to ‘read.Rout.save’ ...274a275,279 > Warning messages: > 1: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (identifier) already exists in (PointTimeSeriesObservation). Skipping newer ones > 2: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (name) already exists in (PointTimeSeriesObservation). Skipping newer ones   Running ‘roundtrip.R’ [4s/10s]   Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ... OK   Running ‘s2.R’   Comparing ‘s2.Rout’ to ‘s2.Rout.save’ ... OK   Running ‘sample.R’   Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK   Running ‘sfc.R’ [28s/73s]   Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...614c614 < Bounding box: xmin: 406261.8 ymin: 48374.95 xmax: 3052888 ymax: 1044157 --- > Bounding box: xmin: 406265 ymin: 48359.7 xmax: 3052877 ymax: 1044143 629,633c629,633 < 1 10 1364 0 19 A 4 #fb80724d MULTIPOLYGON (((1270815 913... < 2 10 542 3 12 A 4 #fb80724d MULTIPOLYGON (((1340555 959... < 3 208 3616 6 260 A 5 #80b1d34d MULTIPOLYGON (((1570591 910... < 4 123 830 2 145 A 10 #bc80bd4d MULTIPOLYGON (((2881208 948... < 5 1066 1606 3 1197 A 8 #fccde54d MULTIPOLYGON (((2525701 911... --- > 1 10 1364 0 19 A 4 #fb80724d MULTIPOLYGON (((1270813 913... > 2 10 542 3 12 A 4 #fb80724d MULTIPOLYGON (((1340553 959... > 3 208 3616 6 260 A 5 #80b1d34d MULTIPOLYGON (((1570586 910... > 4 123 830 2 145 A 10 #bc80bd4d MULTIPOLYGON (((2881206 948... > 5 1066 1606 3 1197 A 8 #fccde54d MULTIPOLYGON (((2525700 911... 635,638c635,638 < 7 115 350 2 139 A 10 #bc80bd4d MULTIPOLYGON (((2881208 948... < 8 254 594 2 371 A 9 #d9d9d94d MULTIPOLYGON (((2717989 951... < 9 748 1190 2 844 A 8 #fccde54d MULTIPOLYGON (((2203890 914... < 10 160 2038 5 176 A 5 #80b1d34d MULTIPOLYGON (((1697623 911... --- > 7 115 350 2 139 A 10 #bc80bd4d MULTIPOLYGON (((2881206 948... > 8 254 594 2 371 A 9 #d9d9d94d MULTIPOLYGON (((2717988 951... > 9 748 1190 2 844 A 8 #fccde54d MULTIPOLYGON (((2203888 914... > 10 160 2038 5 176 A 5 #80b1d34d MULTIPOLYGON (((1697618 911... 721c721 < Bounding box: xmin: 1216510 ymin: 935867 xmax: 1428880 ymax: 1031510 --- > Bounding box: xmin: 1216510 ymin: 935852 xmax: 1428880 ymax: 1031490 724,728c724,728 < POINT (1264559 935867) < POINT (1256623 949384) < POINT (1222665 972639) < POINT (1333530 968278) < POINT (1310838 958645) --- > POINT (1264558 935852) > POINT (1256623 949369) > POINT (1222665 972624) > POINT (1333528 968263) > POINT (1310837 958630) 738c738 < Bounding box: xmin: -81.6893 ymin: 36.2492 xmax: -80.914 ymax: 36.5726 --- > Bounding box: xmin: -81.6893 ymin: 36.2491 xmax: -80.914 ymax: 36.5726   Running ‘sfg.R’   Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK   Running ‘spatstat.R’ [8s/25s]   Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ... OK   Running ‘stars.R’ [9s/25s]   Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 118c118 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84)   Running ‘testthat.R’ [38s/78s]   Running ‘units.R’   Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK   Running ‘wkb.R’   Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [94s/243s] OK
• checking PDF version of manual ... [16s/36s] OK
• checking HTML version of manual ... [9s/23s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 NOTEs