* installing *source* package ‘sbrl’ ...
** package ‘sbrl’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... /usr/local/clang19/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang19/bin/clang accepts -g... yes
checking for /usr/local/clang19/bin/clang option to enable C11 features... none needed
checking how to run the C preprocessor... /usr/local/clang19/bin/clang -E
checking whether the compiler supports GNU C++... yes
checking whether /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 accepts -g... yes
checking for /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 option to enable C++11 features... none needed
checking for gsl-config... /usr/bin/gsl-config
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for gmp.h... yes
checking for __gmpz_init in -lgmp... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘clang version 19.1.3’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sbrl/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DGMP -isystem /usr/local/clang19/include -I/usr/local/clang/include -I/usr/include  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -DGMP -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -I/usr/include  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c rcpp_module.cpp -o rcpp_module.o
rcpp_module.cpp:68:17: warning: variable '_tmp' set but not used [-Wunused-but-set-variable]
   68 |                 REPORT_TIME("Initialize time", "per rule", tv_end, data.nrules);
      |                 ^
./mytime.h:51:8: note: expanded from macro 'REPORT_TIME'
   51 |         float _tmp;                                                     \
      |               ^
rcpp_module.cpp:105:17: warning: variable '_tmp' set but not used [-Wunused-but-set-variable]
  105 |                 REPORT_TIME("Time to train", "", tv_end, 1);
      |                 ^
./mytime.h:51:8: note: expanded from macro 'REPORT_TIME'
   51 |         float _tmp;                                                     \
      |               ^
2 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DGMP -isystem /usr/local/clang19/include -I/usr/local/clang/include -I/usr/include  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -DGMP -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -I/usr/include  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c rulelib.cpp -o rulelib.o
rulelib.cpp:582:11: warning: variable 'cnt_check' set but not used [-Wunused-but-set-variable]
  582 |         int cnt, cnt_check, k, temp;
      |                  ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DGMP -isystem /usr/local/clang19/include -I/usr/local/clang/include -I/usr/include  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -DGMP -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -I/usr/include  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c train.cpp -o train.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o sbrl.so rcpp_module.o rulelib.o train.o -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -lgsl -lgslcblas -lm -lgmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sbrl/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sbrl/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sbrl/src'
installing to /data/gannet/ripley/R/packages/tests-clang/sbrl.Rcheck/00LOCK-sbrl/00new/sbrl/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sbrl)