* installing *source* package ‘ruimtehol’ ...
** package ‘ruimtehol’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/ruimtehol/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/utils/args.cpp -o Starspace/src/utils/args.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/utils/normalize.cpp -o Starspace/src/utils/normalize.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/utils/utils.cpp -o Starspace/src/utils/utils.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/data.cpp -o Starspace/src/data.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/dict.cpp -o Starspace/src/dict.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/doc_data.cpp -o Starspace/src/doc_data.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/doc_parser.cpp -o Starspace/src/doc_parser.o
In file included from Starspace/src/doc_parser.cpp:16:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string/std_containers_traits.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/model.cpp -o Starspace/src/model.o
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:809:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix<float>::const_iterator2, float>' requested here
809 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:241:50: note: in instantiation of member class 'boost::numeric::ublas::matrix<float>::const_iterator2' requested here
241 | public iterator_base_traits<typename const_subiterator_type::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1650:64: note: in instantiation of member class 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::const_iterator' requested here
1650 | typedef typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1744:16: note: in instantiation of template class 'boost::numeric::ublas::vector_scalar_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, float>>' requested here
1744 | return expression_type (e1 (), e2 ());
| ^
Starspace/src/model.cpp:114:17: note: in instantiation of function template specialization 'boost::numeric::ublas::inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>>' requested here
114 | return ublas::inner_prod(a, b);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:241:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::const_iterator, float>' requested here
241 | public iterator_base_traits<typename const_subiterator_type::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1650:64: note: in instantiation of member class 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::const_iterator' requested here
1650 | typedef typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1744:16: note: in instantiation of template class 'boost::numeric::ublas::vector_scalar_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, float>>' requested here
1744 | return expression_type (e1 (), e2 ());
| ^
Starspace/src/model.cpp:114:17: note: in instantiation of function template specialization 'boost::numeric::ublas::inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>>' requested here
114 | return ublas::inner_prod(a, b);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1333:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator, float>' requested here
1333 | public iterator_base_traits<typename E1::const_iterator::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:654:88: note: in instantiation of member class 'boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator' requested here
654 | typename E2::const_iterator::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:139:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
139 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this + ae));
| ^
Starspace/src/proj.h:58:14: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator+=<boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
58 | outRow += this->row(pair.first) * pair.second;
| ^
Starspace/src/model.cpp:146:19: note: in instantiation of member function 'starspace::SparseLinear<>::forward' requested here
146 | LHSEmbeddings_->forward(ws, retval);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:653:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator, float>' requested here
653 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:139:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
139 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this + ae));
| ^
Starspace/src/proj.h:58:14: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator+=<boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
58 | outRow += this->row(pair.first) * pair.second;
| ^
Starspace/src/model.cpp:146:19: note: in instantiation of member function 'starspace::SparseLinear<>::forward' requested here
146 | LHSEmbeddings_->forward(ws, retval);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:518:18: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector<float>::const_iterator, float>' requested here
518 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector<float>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:139:13: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector<float>>' requested here
139 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this + ae));
| ^
Starspace/src/proj.h:58:14: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator+=<boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
58 | outRow += this->row(pair.first) * pair.second;
| ^
Starspace/src/model.cpp:146:19: note: in instantiation of member function 'starspace::SparseLinear<>::forward' requested here
146 | LHSEmbeddings_->forward(ws, retval);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
149 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:3564:20: note: in instantiation of template class 'boost::numeric::ublas::bidirectional_iterator_base<boost::numeric::ublas::sparse_bidirectional_iterator_tag, boost::numeric::ublas::zero_matrix<float>::const_iterator1, float>' requested here
3564 | public bidirectional_iterator_base<sparse_bidirectional_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::zero_matrix<float>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:359:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
359 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:342:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::assign<boost::numeric::ublas::zero_matrix<float>>' requested here
342 | assign (m);
| ^
Starspace/src/model.cpp:454:18: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator=<boost::numeric::ublas::zero_matrix<float>>' requested here
454 | negMean.matrix = zero_matrix<Real>(1, cols);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
149 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:3710:20: note: in instantiation of template class 'boost::numeric::ublas::bidirectional_iterator_base<boost::numeric::ublas::sparse_bidirectional_iterator_tag, boost::numeric::ublas::zero_matrix<float>::const_iterator2, float>' requested here
3710 | public bidirectional_iterator_base<sparse_bidirectional_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1365:59: note: in instantiation of member class 'boost::numeric::ublas::zero_matrix<float>::const_iterator2' requested here
1365 | typename E::const_iterator2::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:359:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
359 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:342:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::assign<boost::numeric::ublas::zero_matrix<float>>' requested here
342 | assign (m);
| ^
Starspace/src/model.cpp:454:18: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator=<boost::numeric::ublas::zero_matrix<float>>' requested here
454 | negMean.matrix = zero_matrix<Real>(1, cols);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:990:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix<float>::iterator2, float>' requested here
990 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:969:31: note: in instantiation of member class 'boost::numeric::ublas::matrix<float>::iterator2' requested here
969 | typedef F<typename M::iterator2::reference, typename E::value_type> functor_type;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1371:9: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::basic_full<>, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
1371 | matrix_assign<F, unrestricted> (m, e, storage_category (), orientation_category ());
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:359:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
359 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:342:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::assign<boost::numeric::ublas::zero_matrix<float>>' requested here
342 | assign (m);
| ^
Starspace/src/model.cpp:454:18: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator=<boost::numeric::ublas::zero_matrix<float>>' requested here
454 | negMean.matrix = zero_matrix<Real>(1, cols);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:486:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix<float>::const_iterator1, float>' requested here
486 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2149:81: note: in instantiation of member class 'boost::numeric::ublas::matrix<float>::const_iterator1' requested here
2149 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:3054:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator1, float>' requested here
3054 | public iterator_base_traits<typename E2::const_iterator1::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2150:19: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator1' requested here
2150 | typename E2::const_iterator1::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2149:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1, float>' requested here
2149 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:3233:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator2, float>' requested here
3233 | public iterator_base_traits<typename E2::const_iterator2::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2501:19: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator2' requested here
2501 | typename E2::const_iterator2::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1365:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator2' requested here
1365 | typename E::const_iterator2::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2500:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator2, float>' requested here
2500 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator2::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1365:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator2' requested here
1365 | typename E::const_iterator2::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1090:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator, float>' requested here
1090 | public iterator_base_traits<typename E2::const_iterator::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:654:88: note: in instantiation of member class 'boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator' requested here
654 | typename E2::const_iterator::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:151:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
151 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this - ae));
| ^
Starspace/src/model.cpp:630:10: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator-=<boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
630 | dest -= (rate * src);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:653:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>::const_iterator, float>' requested here
653 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:151:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
151 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this - ae));
| ^
Starspace/src/model.cpp:630:10: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator-=<boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
630 | dest -= (rate * src);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
16 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/parser.cpp -o Starspace/src/parser.o
In file included from Starspace/src/parser.cpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string/std_containers_traits.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/proj.cpp -o Starspace/src/proj.o
In file included from Starspace/src/proj.cpp:11:
In file included from Starspace/src/proj.h:14:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/starspace.cpp -o Starspace/src/starspace.o
In file included from Starspace/src/starspace.cpp:11:
In file included from Starspace/src/starspace.h:14:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
In file included from Starspace/src/starspace.cpp:11:
In file included from Starspace/src/starspace.h:12:
In file included from Starspace/src/utils/args.h:12:
In file included from /usr/local/clang19/bin/../include/c++/v1/iostream:42:
In file included from /usr/local/clang19/bin/../include/c++/v1/ios:220:
In file included from /usr/local/clang19/bin/../include/c++/v1/__locale:15:
In file included from /usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:24:
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::DataParser' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::DataParser>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::DataParser>>::destroy<starspace::DataParser, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::DataParser, std::allocator<starspace::DataParser>>::__on_zero_shared_impl<std::allocator<starspace::DataParser>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::DataParser, std::allocator<starspace::DataParser>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::DataParser, std::allocator<starspace::DataParser>>::__shared_ptr_emplace<std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, std::allocator<starspace::DataParser>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::DataParser, std::allocator<starspace::DataParser>, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:35:15: note: in instantiation of function template specialization 'std::make_shared<starspace::DataParser, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
35 | parser_ = make_shared<DataParser>(dict_, args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::LayerDataParser' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::LayerDataParser>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::LayerDataParser>>::destroy<starspace::LayerDataParser, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>>::__on_zero_shared_impl<std::allocator<starspace::LayerDataParser>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>>::__shared_ptr_emplace<std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, std::allocator<starspace::LayerDataParser>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:37:15: note: in instantiation of function template specialization 'std::make_shared<starspace::LayerDataParser, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
37 | parser_ = make_shared<LayerDataParser>(dict_, args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::InternDataHandler' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::InternDataHandler>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::InternDataHandler>>::destroy<starspace::InternDataHandler, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>>::__on_zero_shared_impl<std::allocator<starspace::InternDataHandler>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>>::__shared_ptr_emplace<std::shared_ptr<starspace::Args> &, std::allocator<starspace::InternDataHandler>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:63:12: note: in instantiation of function template specialization 'std::make_shared<starspace::InternDataHandler, std::shared_ptr<starspace::Args> &, 0>' requested here
63 | return make_shared<InternDataHandler>(args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::LayerDataHandler' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::LayerDataHandler>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::LayerDataHandler>>::destroy<starspace::LayerDataHandler, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>>::__on_zero_shared_impl<std::allocator<starspace::LayerDataHandler>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>>::__shared_ptr_emplace<std::shared_ptr<starspace::Args> &, std::allocator<starspace::LayerDataHandler>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:65:12: note: in instantiation of function template specialization 'std::make_shared<starspace::LayerDataHandler, std::shared_ptr<starspace::Args> &, 0>' requested here
65 | return make_shared<LayerDataHandler>(args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
5 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c rcpp_textspace.cpp -o rcpp_textspace.o
In file included from rcpp_textspace.cpp:2:
In file included from ./Starspace/src/starspace.h:14:
In file included from ./Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o ruimtehol.so Starspace/src/utils/args.o Starspace/src/utils/normalize.o Starspace/src/utils/utils.o Starspace/src/data.o Starspace/src/dict.o Starspace/src/doc_data.o Starspace/src/doc_parser.o Starspace/src/model.o Starspace/src/parser.o Starspace/src/proj.o Starspace/src/starspace.o rcpp_textspace.o RcppExports.o -pthread
rm -f Starspace/src/utils/args.o Starspace/src/utils/normalize.o Starspace/src/utils/utils.o Starspace/src/data.o Starspace/src/dict.o Starspace/src/doc_data.o Starspace/src/doc_parser.o Starspace/src/model.o Starspace/src/parser.o Starspace/src/proj.o Starspace/src/starspace.o rcpp_textspace.o RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/ruimtehol/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/ruimtehol/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/utils/args.cpp -o Starspace/src/utils/args.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/utils/normalize.cpp -o Starspace/src/utils/normalize.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/utils/utils.cpp -o Starspace/src/utils/utils.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/data.cpp -o Starspace/src/data.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/dict.cpp -o Starspace/src/dict.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/doc_data.cpp -o Starspace/src/doc_data.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/doc_parser.cpp -o Starspace/src/doc_parser.o
In file included from Starspace/src/doc_parser.cpp:16:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string/std_containers_traits.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/model.cpp -o Starspace/src/model.o
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:809:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix<float>::const_iterator2, float>' requested here
809 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:241:50: note: in instantiation of member class 'boost::numeric::ublas::matrix<float>::const_iterator2' requested here
241 | public iterator_base_traits<typename const_subiterator_type::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1650:64: note: in instantiation of member class 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::const_iterator' requested here
1650 | typedef typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1744:16: note: in instantiation of template class 'boost::numeric::ublas::vector_scalar_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, float>>' requested here
1744 | return expression_type (e1 (), e2 ());
| ^
Starspace/src/model.cpp:114:17: note: in instantiation of function template specialization 'boost::numeric::ublas::inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>>' requested here
114 | return ublas::inner_prod(a, b);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:241:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::const_iterator, float>' requested here
241 | public iterator_base_traits<typename const_subiterator_type::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1650:64: note: in instantiation of member class 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::const_iterator' requested here
1650 | typedef typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1744:16: note: in instantiation of template class 'boost::numeric::ublas::vector_scalar_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, float>>' requested here
1744 | return expression_type (e1 (), e2 ());
| ^
Starspace/src/model.cpp:114:17: note: in instantiation of function template specialization 'boost::numeric::ublas::inner_prod<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>>' requested here
114 | return ublas::inner_prod(a, b);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1333:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator, float>' requested here
1333 | public iterator_base_traits<typename E1::const_iterator::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:654:88: note: in instantiation of member class 'boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator' requested here
654 | typename E2::const_iterator::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:139:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
139 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this + ae));
| ^
Starspace/src/proj.h:58:14: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator+=<boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
58 | outRow += this->row(pair.first) * pair.second;
| ^
Starspace/src/model.cpp:146:19: note: in instantiation of member function 'starspace::SparseLinear<>::forward' requested here
146 | LHSEmbeddings_->forward(ws, retval);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:653:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator, float>' requested here
653 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:139:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
139 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this + ae));
| ^
Starspace/src/proj.h:58:14: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator+=<boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
58 | outRow += this->row(pair.first) * pair.second;
| ^
Starspace/src/model.cpp:146:19: note: in instantiation of member function 'starspace::SparseLinear<>::forward' requested here
146 | LHSEmbeddings_->forward(ws, retval);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:518:18: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector<float>::const_iterator, float>' requested here
518 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector<float>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:139:13: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector<float>>' requested here
139 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this + ae));
| ^
Starspace/src/proj.h:58:14: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator+=<boost::numeric::ublas::vector_binary_scalar2<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, const float, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
58 | outRow += this->row(pair.first) * pair.second;
| ^
Starspace/src/model.cpp:146:19: note: in instantiation of member function 'starspace::SparseLinear<>::forward' requested here
146 | LHSEmbeddings_->forward(ws, retval);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
149 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:3564:20: note: in instantiation of template class 'boost::numeric::ublas::bidirectional_iterator_base<boost::numeric::ublas::sparse_bidirectional_iterator_tag, boost::numeric::ublas::zero_matrix<float>::const_iterator1, float>' requested here
3564 | public bidirectional_iterator_base<sparse_bidirectional_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::zero_matrix<float>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:359:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
359 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:342:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::assign<boost::numeric::ublas::zero_matrix<float>>' requested here
342 | assign (m);
| ^
Starspace/src/model.cpp:454:18: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator=<boost::numeric::ublas::zero_matrix<float>>' requested here
454 | negMean.matrix = zero_matrix<Real>(1, cols);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
149 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:3710:20: note: in instantiation of template class 'boost::numeric::ublas::bidirectional_iterator_base<boost::numeric::ublas::sparse_bidirectional_iterator_tag, boost::numeric::ublas::zero_matrix<float>::const_iterator2, float>' requested here
3710 | public bidirectional_iterator_base<sparse_bidirectional_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1365:59: note: in instantiation of member class 'boost::numeric::ublas::zero_matrix<float>::const_iterator2' requested here
1365 | typename E::const_iterator2::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:359:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
359 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:342:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::assign<boost::numeric::ublas::zero_matrix<float>>' requested here
342 | assign (m);
| ^
Starspace/src/model.cpp:454:18: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator=<boost::numeric::ublas::zero_matrix<float>>' requested here
454 | negMean.matrix = zero_matrix<Real>(1, cols);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::sparse_bidirectional_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:990:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix<float>::iterator2, float>' requested here
990 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:969:31: note: in instantiation of member class 'boost::numeric::ublas::matrix<float>::iterator2' requested here
969 | typedef F<typename M::iterator2::reference, typename E::value_type> functor_type;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1371:9: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::basic_full<>, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
1371 | matrix_assign<F, unrestricted> (m, e, storage_category (), orientation_category ());
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:359:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::zero_matrix<float>>' requested here
359 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:342:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::assign<boost::numeric::ublas::zero_matrix<float>>' requested here
342 | assign (m);
| ^
Starspace/src/model.cpp:454:18: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator=<boost::numeric::ublas::zero_matrix<float>>' requested here
454 | negMean.matrix = zero_matrix<Real>(1, cols);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:486:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix<float>::const_iterator1, float>' requested here
486 | public random_access_iterator_base<dense_random_access_iterator_tag,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2149:81: note: in instantiation of member class 'boost::numeric::ublas::matrix<float>::const_iterator1' requested here
2149 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:3054:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator1, float>' requested here
3054 | public iterator_base_traits<typename E2::const_iterator1::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2150:19: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator1' requested here
2150 | typename E2::const_iterator1::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2149:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1, float>' requested here
2149 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1364:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator1' requested here
1364 | typename E::const_iterator1::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:3233:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator2, float>' requested here
3233 | public iterator_base_traits<typename E2::const_iterator2::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2501:19: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator2' requested here
2501 | typename E2::const_iterator2::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1365:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator2' requested here
1365 | typename E::const_iterator2::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_expression.hpp:2500:13: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator2, float>' requested here
2500 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator2::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/matrix_assign.hpp:1365:59: note: in instantiation of member class 'boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>::const_iterator2' requested here
1365 | typename E::const_iterator2::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:172:13: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
172 | matrix_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:365:23: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::matrix<boost::numeric::ublas::matrix_binary<boost::numeric::ublas::matrix<float>, boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_plus<float, float>>>' requested here
365 | self_type temporary (*this + ae);
| ^
Starspace/src/matrix.h:103:12: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix<float>::operator+=<boost::numeric::ublas::matrix_binary_scalar1<const float, boost::numeric::ublas::matrix<float>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
103 | matrix += scale * rhs.matrix;
| ^
Starspace/src/model.cpp:476:15: note: in instantiation of member function 'starspace::Matrix<>::add' requested here
476 | negMean.add(rhsN);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:1090:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator, float>' requested here
1090 | public iterator_base_traits<typename E2::const_iterator::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:654:88: note: in instantiation of member class 'boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>::const_iterator' requested here
654 | typename E2::const_iterator::iterator_category>::iterator_category>::template
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:151:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
151 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this - ae));
| ^
Starspace/src/model.cpp:630:10: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator-=<boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
630 | dest -= (rate * src);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from Starspace/src/model.cpp:10:
In file included from Starspace/src/model.h:12:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' is deprecated [-Wdeprecated-declarations]
204 | public std::iterator<IC, T> {
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector_expression.hpp:653:20: note: in instantiation of template class 'boost::numeric::ublas::random_access_iterator_base<boost::numeric::ublas::dense_random_access_iterator_tag, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>::const_iterator, float>' requested here
653 | public iterator_base_traits<typename iterator_restrict_traits<typename E1::const_iterator::iterator_category,
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/detail/vector_assign.hpp:486:59: note: in instantiation of member class 'boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>::const_iterator' requested here
486 | typename E::const_iterator::iterator_category>::storage_category storage_category;
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:131:10: note: in instantiation of function template specialization 'boost::numeric::ublas::vector_assign<boost::numeric::ublas::scalar_assign, boost::numeric::ublas::vector<float>, boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
131 | vector_assign<scalar_assign> (*this, ae);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix_proxy.hpp:151:50: note: in instantiation of function template specialization 'boost::numeric::ublas::vector<float>::vector<boost::numeric::ublas::vector_binary<boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>, boost::numeric::ublas::scalar_minus<float, float>>>' requested here
151 | vector_assign<scalar_assign> (*this, typename vector_temporary_traits<M>::type (*this - ae));
| ^
Starspace/src/model.cpp:630:10: note: in instantiation of function template specialization 'boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>::operator-=<boost::numeric::ublas::vector_binary_scalar1<const float, boost::numeric::ublas::matrix_row<boost::numeric::ublas::matrix<float>>, boost::numeric::ublas::scalar_multiplies<float, float>>>' requested here
630 | dest -= (rate * src);
| ^
/usr/local/clang19/bin/../include/c++/v1/__iterator/iterator.h:23:29: note: 'iterator<boost::numeric::ublas::dense_random_access_iterator_tag, float>' has been explicitly marked deprecated here
23 | struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 iterator {
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:723:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
723 | # define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
| ^
/usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED'
688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
16 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/parser.cpp -o Starspace/src/parser.o
In file included from Starspace/src/parser.cpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/algorithm/string/std_containers_traits.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/proj.cpp -o Starspace/src/proj.o
In file included from Starspace/src/proj.cpp:11:
In file included from Starspace/src/proj.h:14:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c Starspace/src/starspace.cpp -o Starspace/src/starspace.o
In file included from Starspace/src/starspace.cpp:11:
In file included from Starspace/src/starspace.h:14:
In file included from Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
In file included from Starspace/src/starspace.cpp:11:
In file included from Starspace/src/starspace.h:12:
In file included from Starspace/src/utils/args.h:12:
In file included from /usr/local/clang19/bin/../include/c++/v1/iostream:42:
In file included from /usr/local/clang19/bin/../include/c++/v1/ios:220:
In file included from /usr/local/clang19/bin/../include/c++/v1/__locale:15:
In file included from /usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:24:
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::DataParser' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::DataParser>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::DataParser>>::destroy<starspace::DataParser, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::DataParser, std::allocator<starspace::DataParser>>::__on_zero_shared_impl<std::allocator<starspace::DataParser>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::DataParser, std::allocator<starspace::DataParser>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::DataParser, std::allocator<starspace::DataParser>>::__shared_ptr_emplace<std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, std::allocator<starspace::DataParser>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::DataParser, std::allocator<starspace::DataParser>, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:35:15: note: in instantiation of function template specialization 'std::make_shared<starspace::DataParser, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
35 | parser_ = make_shared<DataParser>(dict_, args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::LayerDataParser' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::LayerDataParser>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::LayerDataParser>>::destroy<starspace::LayerDataParser, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>>::__on_zero_shared_impl<std::allocator<starspace::LayerDataParser>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>>::__shared_ptr_emplace<std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, std::allocator<starspace::LayerDataParser>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::LayerDataParser, std::allocator<starspace::LayerDataParser>, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:37:15: note: in instantiation of function template specialization 'std::make_shared<starspace::LayerDataParser, std::shared_ptr<starspace::Dictionary> &, std::shared_ptr<starspace::Args> &, 0>' requested here
37 | parser_ = make_shared<LayerDataParser>(dict_, args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::InternDataHandler' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::InternDataHandler>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::InternDataHandler>>::destroy<starspace::InternDataHandler, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>>::__on_zero_shared_impl<std::allocator<starspace::InternDataHandler>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>>::__shared_ptr_emplace<std::shared_ptr<starspace::Args> &, std::allocator<starspace::InternDataHandler>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::InternDataHandler, std::allocator<starspace::InternDataHandler>, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:63:12: note: in instantiation of function template specialization 'std::make_shared<starspace::InternDataHandler, std::shared_ptr<starspace::Args> &, 0>' requested here
63 | return make_shared<InternDataHandler>(args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:81: warning: destructor called on non-final 'starspace::LayerDataHandler' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator_traits.h:334:9: note: in instantiation of member function 'std::allocator<starspace::LayerDataHandler>::destroy' requested here
334 | __a.destroy(__p);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:283:33: note: in instantiation of function template specialization 'std::allocator_traits<std::allocator<starspace::LayerDataHandler>>::destroy<starspace::LayerDataHandler, 0>' requested here
283 | allocator_traits<_TpAlloc>::destroy(__tmp, __get_elem());
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:286:78: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>>::__on_zero_shared_impl<std::allocator<starspace::LayerDataHandler>, 0>' requested here
286 | _LIBCPP_HIDE_FROM_ABI_VIRTUAL void __on_zero_shared() _NOEXCEPT override { __on_zero_shared_impl(); }
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:261:34: note: in instantiation of member function 'std::__shared_ptr_emplace<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>>::__on_zero_shared' requested here
261 | _LIBCPP_HIDE_FROM_ABI explicit __shared_ptr_emplace(_Alloc __a, _Args&&... __args) : __storage_(std::move(__a)) {
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:843:51: note: in instantiation of function template specialization 'std::__shared_ptr_emplace<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>>::__shared_ptr_emplace<std::shared_ptr<starspace::Args> &, std::allocator<starspace::LayerDataHandler>, 0>' requested here
843 | ::new ((void*)std::addressof(*__guard.__get())) _ControlBlock(__a, std::forward<_Args>(__args)...);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/shared_ptr.h:851:15: note: in instantiation of function template specialization 'std::allocate_shared<starspace::LayerDataHandler, std::allocator<starspace::LayerDataHandler>, std::shared_ptr<starspace::Args> &, 0>' requested here
851 | return std::allocate_shared<_Tp>(allocator<__remove_cv_t<_Tp> >(), std::forward<_Args>(__args)...);
| ^
Starspace/src/starspace.cpp:65:12: note: in instantiation of function template specialization 'std::make_shared<starspace::LayerDataHandler, std::shared_ptr<starspace::Args> &, 0>' requested here
65 | return make_shared<LayerDataHandler>(args_);
| ^
/usr/local/clang19/bin/../include/c++/v1/__memory/allocator.h:168:87: note: qualify call to silence this warning
168 | _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_HIDE_FROM_ABI void destroy(pointer __p) { __p->~_Tp(); }
| ^
5 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c rcpp_textspace.cpp -o rcpp_textspace.o
In file included from rcpp_textspace.cpp:2:
In file included from ./Starspace/src/starspace.h:14:
In file included from ./Starspace/src/matrix.h:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/matrix.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/config.hpp:48:
/data/gannet/ripley/R/test-clang/BH/include/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
98 | # define BOOST_NO_AUTO_PTR
| ^
<command line>:3:9: note: previous definition is here
3 | #define BOOST_NO_AUTO_PTR 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I./Starspace/src -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/ruimtehol/src'
installing to /data/gannet/ripley/R/packages/tests-clang/ruimtehol.Rcheck/00LOCK-ruimtehol/00new/ruimtehol/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ruimtehol)