- using R Under development (unstable) (2025-12-19 r89201)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.8
flang version 21.1.8
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘rsparse/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘rsparse’ version ‘0.5.3’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘rsparse’ can be installed ... [306s/280s] OK
See the install log for details.
- used C++ compiler: ‘clang version 21.1.8’
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘MatrixExtra’
All declared Imports should be used.
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [24s/49s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... [10s/15s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [57s/104s] ERROR
Running ‘testthat.R’ [56s/103s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> Sys.setenv("R_TESTS" = "")
> library(testthat)
> library(rsparse)
Loading required package: Matrix
> library(data.table)
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
> library(Matrix)
> options(rsparse_omp_threads = 1L)
> logger = lgr::get_logger('rsparse')
> logger$set_threshold('warn')
> data("movielens100k")
> test_check("rsparse")
Saving _problems/test-linear-flow-13.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 462 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-linear-flow.R:13:3'): test linear-flow ─────────────────────────
Error in ``[.data.table`(temp, , `:=`(train, sample(c(FALSE, TRUE), .N, replace = TRUE, prob = c(test_proportion, cv_proportion))), keyby = i)`: attempt access index 3/3 in VECTOR_ELT
Backtrace:
▆
1. └─rsparse:::train_test_split(cv) at test-linear-flow.R:13:3
2. ├─...[]
3. └─data.table:::`[.data.table`(...)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 462 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [8s/15s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR, 1 NOTE