* installing *source* package ‘rnetcarto’ ...
** this is package ‘rnetcarto’ version ‘0.2.6’
** package ‘rnetcarto’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang20/bin/clang -std=gnu23 accepts -g... yes
checking for /usr/local/clang20/bin/clang -std=gnu23 option to enable C11 features... -std=gnu11
checking for gsl-config... /usr/bin/gsl-config
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘clang version 20.1.0-rc2’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rnetcarto/src'
/usr/local/clang20/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang20/include -I/usr/local/clang/include   -I/usr/include -I../inst/include -Irgraph -Irgraph/src -DRPACKAGE -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rgraph/src/fillpartitions.c -o rgraph/src/fillpartitions.o
/usr/local/clang20/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang20/include -I/usr/local/clang/include   -I/usr/include -I../inst/include -Irgraph -Irgraph/src -DRPACKAGE -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rgraph/src/movements.c -o rgraph/src/movements.o
/usr/local/clang20/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang20/include -I/usr/local/clang/include   -I/usr/include -I../inst/include -Irgraph -Irgraph/src -DRPACKAGE -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rgraph/src/partition.c -o rgraph/src/partition.o
/usr/local/clang20/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang20/include -I/usr/local/clang/include   -I/usr/include -I../inst/include -Irgraph -Irgraph/src -DRPACKAGE -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rgraph/src/sannealing.c -o rgraph/src/sannealing.o
/usr/local/clang20/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang20/include -I/usr/local/clang/include   -I/usr/include -I../inst/include -Irgraph -Irgraph/src -DRPACKAGE -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c main.c -o main.o
/usr/local/clang20/bin/clang -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o rnetcarto.so rgraph/src/fillpartitions.o rgraph/src/movements.o rgraph/src/partition.o rgraph/src/sannealing.o main.o -lgsl -lgslcblas -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rnetcarto/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rnetcarto/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rnetcarto/src'
installing to /data/gannet/ripley/R/packages/tests-clang/rnetcarto.Rcheck/00LOCK-rnetcarto/00new/rnetcarto/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rnetcarto)