* installing *source* package ‘rlibkriging’ ...
** package ‘rlibkriging’ successfully unpacked and MD5 sums checked
** using staged installation
set CMAKE_BIN=/usr/bin/cmake3
set CC=/usr/local/clang19/bin/clang
set FC=/usr/local/clang19/bin/flang-new
set CFLAGS=-isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3
set CXX=/usr/local/clang19/bin/clang++ -stdlib=libc++
set CXXFLAGS=-std=gnu++17 -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3
set LDFLAGS=-L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64
travis-ci
--  [31mC [32mo [33ml [34mo [35mr  [36mm [37mo [1;31md [1;32me  [1;33me [1;34mn [1;35ma [1;36mb [1;37ml [31me [32md [m
fatal: not a git repository (or any parent up to mount point /data)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
-- The C compiler identification is Clang 19.1.5
-- The CXX compiler identification is Clang 19.1.5
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/local/clang19/bin/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/local/clang19/bin/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- *** set cmake policy CMP0025 to NEW
-- CMAKE_CXX_STANDARD = 11
-- Configuring Armadillo 11.4.2
-- 
-- *** WARNING: variable 'CMAKE_CXX_FLAGS' is not empty; this may cause problems!
-- 
-- Detected Clang 6.0 or later
-- ARMA_USE_EXTERN_RNG = true
-- CMAKE_SYSTEM_NAME          = Linux
-- CMAKE_CXX_COMPILER_ID      = Clang
-- CMAKE_CXX_COMPILER_VERSION = 19.1.5
-- CMAKE_COMPILER_IS_GNUCXX   = 
-- 
-- *** Options:
-- BUILD_SHARED_LIBS         = off
-- DETECT_HDF5               = false
-- OPENBLAS_PROVIDES_LAPACK  = OFF
-- ALLOW_FLEXIBLAS_LINUX     = ON
-- ALLOW_OPENBLAS_MACOS      = OFF
-- ALLOW_BLAS_LAPACK_MACOS   = OFF
-- BUILD_SMOKE_TEST          = OFF
-- 
-- *** Looking for external libraries
-- Found FlexiBLAS: /usr/lib64/libflexiblas.so
-- Found ATLAS: /usr/lib64/atlas/libtatlas.so
-- Found BLAS: /usr/lib64/libblas.so
-- Found LAPACK: /usr/lib64/liblapack.so
-- FlexiBLAS_FOUND = YES
--       MKL_FOUND = NO
--  OpenBLAS_FOUND = NO
--     ATLAS_FOUND = YES
--      BLAS_FOUND = YES
--    LAPACK_FOUND = YES
-- 
-- *** Using FlexiBLAS to access BLAS and LAPACK functions.
-- *** https://www.mpi-magdeburg.mpg.de/projects/flexiblas
-- *** WARNING: SuperLU and ARPACK must also link with FlexiBLAS.
-- 
-- *** If using FlexiBLAS causes problems, 
-- *** rerun cmake with FlexiBLAS detection disabled:
-- *** cmake -D ALLOW_FLEXIBLAS_LINUX=false .
-- 
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0") 
-- Found ARPACK: /usr/lib64/libarpack.so
-- ARPACK_FOUND = YES
-- Looking for SuperLU version 5
-- Found SuperLU: /usr/lib64/libsuperlu.so
-- SuperLU_FOUND = YES
-- SuperLU_INCLUDE_DIR = /usr/include/SuperLU
-- 
-- *** Result of configuration:
-- *** ARMA_USE_WRAPPER    = true
-- *** ARMA_USE_LAPACK     = true
-- *** ARMA_USE_BLAS       = true
-- *** ARMA_USE_ATLAS      = false
-- *** ARMA_USE_HDF5_CMAKE = false
-- *** ARMA_USE_ARPACK     = true
-- *** ARMA_USE_EXTERN_RNG = true
-- *** ARMA_USE_SUPERLU    = true
-- 
-- *** Armadillo wrapper library will use the following libraries:
-- *** ARMA_LIBS = /usr/lib64/libflexiblas.so;/usr/lib64/libarpack.so;/usr/lib64/libsuperlu.so
-- 
-- Copying /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/armadillo/include/ to /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/tmp/include/
-- Generating /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/tmp/include/config.hpp
-- CMAKE_CXX_FLAGS           = -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -O2
-- CMAKE_SHARED_LINKER_FLAGS = -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -Wl,--no-as-needed
-- CMAKE_REQUIRED_INCLUDES   = /usr/include/SuperLU
-- 
-- CMAKE_INSTALL_PREFIX     = /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/installed
-- CMAKE_INSTALL_LIBDIR     = lib
-- CMAKE_INSTALL_INCLUDEDIR = include
-- CMAKE_INSTALL_DATADIR    = share
-- CMAKE_INSTALL_BINDIR     = bin
-- Generating '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/ArmadilloConfig.cmake'
-- Generating '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/ArmadilloConfigVersion.cmake'
-- Generating '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfig.cmake'
-- Generating '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfigVersion.cmake'
-- Copying /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/armadillo/misc/ to /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/tmp/misc/
-- Generating '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build/armadillo/tmp/misc/armadillo.pc'
-- Build static library
-- Static analysis available but disabled as requested.
-- Octave binding available [v6.4.0] but disabled as requested.
-- Could NOT find Matlab (missing: Matlab_INCLUDE_DIRS MAIN_PROGRAM) (found version "NOTFOUND")
-- Matlab binding not available
-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.10.11", minimum required is "3.7") 
-- Checking Python requirements
   ✘ Module pytest is NOT available
   ✔ Module numpy>=1.18,<2 is available
   ✔ Module setuptools is available
   ✔ Module packaging is available
   ✘ Module wheel is NOT available
-- Python requirement failure:
	python3 interpreter found: /usr/bin/python3
-- Python binding not available.
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- clang-format target for updating code format is available
-- doc target for documentation generation is available
-- Configuring done (9.7s)
-- Generating done (0.0s)
-- Build files have been written to: /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build
gmake[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
make[4]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
make[4]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
make[4]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
[  3%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/blas.c.o
[  6%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/lbfgsb.c.o
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:389:11: warning: unused variable 'o__1' [-Wunused-variable]
  389 |     olist o__1;
      |           ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:499:19: warning: unused variable 'io___56' [-Wunused-variable]
  499 |     static cilist io___56 = { 0, 6, 0, fmt_1002, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:500:19: warning: unused variable 'io___57' [-Wunused-variable]
  500 |     static cilist io___57 = { 0, 0, 0, fmt_1003, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:501:19: warning: unused variable 'io___58' [-Wunused-variable]
  501 |     static cilist io___58 = { 0, 6, 0, fmt_1001, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:502:19: warning: unused variable 'io___60' [-Wunused-variable]
  502 |     static cilist io___60 = { 0, 6, 0, fmt_1005, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:503:19: warning: unused variable 'io___62' [-Wunused-variable]
  503 |     static cilist io___62 = { 0, 6, 0, fmt_1006, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:504:19: warning: unused variable 'io___63' [-Wunused-variable]
  504 |     static cilist io___63 = { 0, 6, 0, fmt_1005, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:505:19: warning: unused variable 'io___65' [-Wunused-variable]
  505 |     static cilist io___65 = { 0, 6, 0, fmt_1008, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:506:19: warning: unused variable 'io___69' [-Wunused-variable]
  506 |     static cilist io___69 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:507:19: warning: unused variable 'io___70' [-Wunused-variable]
  507 |     static cilist io___70 = { 0, 6, 0, fmt_1007, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1259:25: warning: variable 'nbdd' set but not used [-Wunused-but-set-variable]
 1259 |     static integer i__, nbdd;
      |                         ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1262:19: warning: unused variable 'io___75' [-Wunused-variable]
 1262 |     static cilist io___75 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1263:19: warning: unused variable 'io___76' [-Wunused-variable]
 1263 |     static cilist io___76 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1264:19: warning: unused variable 'io___77' [-Wunused-variable]
 1264 |     static cilist io___77 = { 0, 6, 0, fmt_1001, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1581:19: warning: unused variable 'io___82' [-Wunused-variable]
 1581 |     static cilist io___82 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1582:19: warning: unused variable 'io___90' [-Wunused-variable]
 1582 |     static cilist io___90 = { 0, 6, 0, fmt_3010, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1583:19: warning: unused variable 'io___99' [-Wunused-variable]
 1583 |     static cilist io___99 = { 0, 6, 0, fmt_1010, 0 };
      |                   ^~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1584:19: warning: unused variable 'io___104' [-Wunused-variable]
 1584 |     static cilist io___104 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1585:19: warning: unused variable 'io___111' [-Wunused-variable]
 1585 |     static cilist io___111 = { 0, 6, 0, fmt_4011, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1586:19: warning: unused variable 'io___112' [-Wunused-variable]
 1586 |     static cilist io___112 = { 0, 6, 0, fmt_5010, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1587:19: warning: unused variable 'io___113' [-Wunused-variable]
 1587 |     static cilist io___113 = { 0, 6, 0, fmt_6010, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1588:19: warning: unused variable 'io___116' [-Wunused-variable]
 1588 |     static cilist io___116 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1589:19: warning: unused variable 'io___121' [-Wunused-variable]
 1589 |     static cilist io___121 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1590:19: warning: unused variable 'io___122' [-Wunused-variable]
 1590 |     static cilist io___122 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1591:19: warning: unused variable 'io___123' [-Wunused-variable]
 1591 |     static cilist io___123 = { 0, 6, 0, fmt_4010, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1592:19: warning: unused variable 'io___124' [-Wunused-variable]
 1592 |     static cilist io___124 = { 0, 6, 0, fmt_6010, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1593:19: warning: unused variable 'io___125' [-Wunused-variable]
 1593 |     static cilist io___125 = { 0, 6, 0, fmt_1010, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1594:19: warning: unused variable 'io___126' [-Wunused-variable]
 1594 |     static cilist io___126 = { 0, 6, 0, fmt_2010, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2809:19: warning: unused variable 'io___163' [-Wunused-variable]
 2809 |     static cilist io___163 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2810:19: warning: unused variable 'io___164' [-Wunused-variable]
 2810 |     static cilist io___164 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2811:19: warning: unused variable 'io___165' [-Wunused-variable]
 2811 |     static cilist io___165 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2812:19: warning: unused variable 'io___167' [-Wunused-variable]
 2812 |     static cilist io___167 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3089:19: warning: unused variable 'io___178' [-Wunused-variable]
 3089 |     static cilist io___178 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3356:13: warning: unused variable 'i__1' [-Wunused-variable]
 3356 |     integer i__1;
      |             ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3364:20: warning: unused variable 'i__' [-Wunused-variable]
 3364 |     static integer i__;
      |                    ^~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3367:19: warning: unused variable 'io___181' [-Wunused-variable]
 3367 |     static cilist io___181 = { 0, 6, 0, fmt_7001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3368:19: warning: unused variable 'io___182' [-Wunused-variable]
 3368 |     static cilist io___182 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3369:19: warning: unused variable 'io___183' [-Wunused-variable]
 3369 |     static cilist io___183 = { 0, 0, 0, fmt_2001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3370:19: warning: unused variable 'io___184' [-Wunused-variable]
 3370 |     static cilist io___184 = { 0, 0, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3371:19: warning: unused variable 'io___185' [-Wunused-variable]
 3371 |     static cilist io___185 = { 0, 0, 0, fmt_9001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3372:19: warning: unused variable 'io___186' [-Wunused-variable]
 3372 |     static cilist io___186 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3373:19: warning: unused variable 'io___188' [-Wunused-variable]
 3373 |     static cilist io___188 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3374:19: warning: unused variable 'io___189' [-Wunused-variable]
 3374 |     static cilist io___189 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3476:13: warning: unused variable 'i__1' [-Wunused-variable]
 3476 |     integer i__1;
      |             ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:20: warning: unused variable 'i__' [-Wunused-variable]
 3485 |     static integer i__, imod;
      |                    ^~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:25: warning: variable 'imod' set but not used [-Wunused-but-set-variable]
 3485 |     static integer i__, imod;
      |                         ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3488:19: warning: unused variable 'io___190' [-Wunused-variable]
 3488 |     static cilist io___190 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3489:19: warning: unused variable 'io___191' [-Wunused-variable]
 3489 |     static cilist io___191 = { 0, 6, 0, fmt_2001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3490:19: warning: unused variable 'io___192' [-Wunused-variable]
 3490 |     static cilist io___192 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3491:19: warning: unused variable 'io___194' [-Wunused-variable]
 3491 |     static cilist io___194 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3492:19: warning: unused variable 'io___196' [-Wunused-variable]
 3492 |     static cilist io___196 = { 0, 6, 0, fmt_2001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3493:19: warning: unused variable 'io___197' [-Wunused-variable]
 3493 |     static cilist io___197 = { 0, 0, 0, fmt_3001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3654:13: warning: unused variable 'i__1' [-Wunused-variable]
 3654 |     integer i__1;
      |             ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3662:20: warning: unused variable 'i__' [-Wunused-variable]
 3662 |     static integer i__;
      |                    ^~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3665:19: warning: unused variable 'io___198' [-Wunused-variable]
 3665 |     static cilist io___198 = { 0, 6, 0, fmt_3003, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3666:19: warning: unused variable 'io___199' [-Wunused-variable]
 3666 |     static cilist io___199 = { 0, 6, 0, fmt_3004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3667:19: warning: unused variable 'io___200' [-Wunused-variable]
 3667 |     static cilist io___200 = { 0, 6, 0, fmt_3005, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3668:19: warning: unused variable 'io___201' [-Wunused-variable]
 3668 |     static cilist io___201 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3669:19: warning: unused variable 'io___203' [-Wunused-variable]
 3669 |     static cilist io___203 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3670:19: warning: unused variable 'io___204' [-Wunused-variable]
 3670 |     static cilist io___204 = { 0, 6, 0, fmt_3009, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3671:19: warning: unused variable 'io___205' [-Wunused-variable]
 3671 |     static cilist io___205 = { 0, 6, 0, fmt_9011, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3672:19: warning: unused variable 'io___206' [-Wunused-variable]
 3672 |     static cilist io___206 = { 0, 6, 0, fmt_9012, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3673:19: warning: unused variable 'io___207' [-Wunused-variable]
 3673 |     static cilist io___207 = { 0, 6, 0, fmt_9013, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3674:19: warning: unused variable 'io___208' [-Wunused-variable]
 3674 |     static cilist io___208 = { 0, 6, 0, fmt_9014, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3675:19: warning: unused variable 'io___209' [-Wunused-variable]
 3675 |     static cilist io___209 = { 0, 6, 0, fmt_9015, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3676:19: warning: unused variable 'io___210' [-Wunused-variable]
 3676 |     static cilist io___210 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3677:19: warning: unused variable 'io___211' [-Wunused-variable]
 3677 |     static cilist io___211 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3678:19: warning: unused variable 'io___212' [-Wunused-variable]
 3678 |     static cilist io___212 = { 0, 6, 0, fmt_9018, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3679:19: warning: unused variable 'io___213' [-Wunused-variable]
 3679 |     static cilist io___213 = { 0, 6, 0, fmt_9019, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3680:19: warning: unused variable 'io___214' [-Wunused-variable]
 3680 |     static cilist io___214 = { 0, 6, 0, fmt_3007, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3681:19: warning: unused variable 'io___215' [-Wunused-variable]
 3681 |     static cilist io___215 = { 0, 6, 0, fmt_3008, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3682:19: warning: unused variable 'io___216' [-Wunused-variable]
 3682 |     static cilist io___216 = { 0, 0, 0, fmt_3002, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3683:19: warning: unused variable 'io___217' [-Wunused-variable]
 3683 |     static cilist io___217 = { 0, 0, 0, fmt_3009, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3684:19: warning: unused variable 'io___218' [-Wunused-variable]
 3684 |     static cilist io___218 = { 0, 0, 0, fmt_9011, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3685:19: warning: unused variable 'io___219' [-Wunused-variable]
 3685 |     static cilist io___219 = { 0, 0, 0, fmt_9012, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3686:19: warning: unused variable 'io___220' [-Wunused-variable]
 3686 |     static cilist io___220 = { 0, 0, 0, fmt_9013, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3687:19: warning: unused variable 'io___221' [-Wunused-variable]
 3687 |     static cilist io___221 = { 0, 0, 0, fmt_9014, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3688:19: warning: unused variable 'io___222' [-Wunused-variable]
 3688 |     static cilist io___222 = { 0, 0, 0, fmt_9015, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3689:19: warning: unused variable 'io___223' [-Wunused-variable]
 3689 |     static cilist io___223 = { 0, 0, 0, fmt_9018, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3690:19: warning: unused variable 'io___224' [-Wunused-variable]
 3690 |     static cilist io___224 = { 0, 0, 0, fmt_9019, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3691:19: warning: unused variable 'io___225' [-Wunused-variable]
 3691 |     static cilist io___225 = { 0, 0, 0, fmt_3008, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3986:19: warning: unused variable 'io___228' [-Wunused-variable]
 3986 |     static cilist io___228 = { 0, 6, 0, fmt_1001, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3987:19: warning: unused variable 'io___242' [-Wunused-variable]
 3987 |     static cilist io___242 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3988:19: warning: unused variable 'io___243' [-Wunused-variable]
 3988 |     static cilist io___243 = { 0, 6, 0, 0, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3989:19: warning: unused variable 'io___246' [-Wunused-variable]
 3989 |     static cilist io___246 = { 0, 6, 0, fmt_1004, 0 };
      |                   ^~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:16: warning: '&&' within '||' [-Wlogical-op-parentheses]
 4705 |     if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin 
      |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:16: note: place parentheses around the '&&' expression to silence this warning
 4705 |     if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin 
      |                ^
      |         (                                         )
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:62: warning: '&&' within '||' [-Wlogical-op-parentheses]
 4705 |     if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin 
      |                                                    ~~ ~~~~~~~^~~~~~~~~~~~~~~~
 4706 |             <= *xtol * stmax) {
      |             ~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:62: note: place parentheses around the '&&' expression to silence this warning
 4705 |     if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin 
      |                                                              ^
      |                                                       (
 4706 |             <= *xtol * stmax) {
      |                             
      |                             )
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:23:16: warning: unused variable 'c__9' [-Wunused-variable]
   23 | static integer c__9 = 9;
      |                ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:25:16: warning: unused variable 'c__3' [-Wunused-variable]
   25 | static integer c__3 = 3;
      |                ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:26:16: warning: unused variable 'c__5' [-Wunused-variable]
   26 | static integer c__5 = 5;
      |                ^~~~
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/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:120:15: warning: unused variable 'd' [-Wunused-variable]
  120 |   arma::uword d = m_X.n_cols;
      |               ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:191:17: warning: unused variable 'p' [-Wunused-variable]
  191 |     arma::uword p = m_F.n_cols;
      |                 ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:501:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
  501 |   return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2)));
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:501:26: note: remove std::move call here
  501 |   return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2)));
      |                          ^~~~~~~~~~           ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:501:50: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
  501 |   return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2)));
      |                                                  ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:501:50: note: remove std::move call here
  501 |   return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2)));
      |                                                  ^~~~~~~~~~                                 ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:497:10: warning: variable 'loo' set but not used [-Wunused-but-set-variable]
  497 |   double loo = -1;
      |          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:123:15: warning: unused variable 'd' [-Wunused-variable]
  123 |   arma::uword d = m_X.n_cols;
      |               ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1146:33: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare]
 1146 |       for (arma::uword i = 0; i < multistart; i++) {  // TODO: use some foreach/pragma to let OpenMP work.
      |                               ~ ^ ~~~~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1311:33: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare]
 1311 |       for (arma::uword i = 0; i < multistart; i++) {  // TODO: use some foreach/pragma to let OpenMP work.
      |                               ~ ^ ~~~~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:904:31: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare]
  904 |     for (arma::uword i = 0; i < multistart; i++) {
      |                             ~ ^ ~~~~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1553:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
 1553 |                          std::move(arma::sqrt(ysd2_n)),
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1553:26: note: remove std::move call here
 1553 |                          std::move(arma::sqrt(ysd2_n)),
      |                          ^~~~~~~~~~                  ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1556:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
 1556 |                          std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones))));
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1556:26: note: remove std::move call here
 1556 |                          std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones))));
      |                          ^~~~~~~~~~                                                                      ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1718:15: warning: unused variable 'd' [-Wunused-variable]
 1718 |   arma::uword d = m_X.n_cols;
      |               ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/Kriging.cpp:1722:15: warning: unused variable 'n_on' [-Wunused-variable]
 1722 |   arma::uword n_on = n_o + n_n;
      |               ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1243:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
 1243 |                          std::move(arma::sqrt(ysd2_n)),
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1243:26: note: remove std::move call here
 1243 |                          std::move(arma::sqrt(ysd2_n)),
      |                          ^~~~~~~~~~                  ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1246:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
 1246 |                          std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones))));
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1246:26: note: remove std::move call here
 1246 |                          std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones))));
      |                          ^~~~~~~~~~                                                                      ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1408:15: warning: unused variable 'd' [-Wunused-variable]
 1408 |   arma::uword d = m_X.n_cols;
      |               ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1412:15: warning: unused variable 'n_on' [-Wunused-variable]
 1412 |   arma::uword n_on = n_o + n_n;
      |               ^~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:121:15: warning: unused variable 'd' [-Wunused-variable]
  121 |   arma::uword d = m_X.n_cols;
      |               ^
[ 75%] Building CXX object src/lib/CMakeFiles/Kriging.dir/KrigingLoader.cpp.o
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:605:50: warning: '&&' within '||' [-Wlogical-op-parentheses]
  605 |                 || (sol_to_b < arma::datum::eps) && (result.num_iters <= 2)  // we fastly converged to one bound
      |                 ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:605:50: note: place parentheses around the '&&' expression to silence this warning
  605 |                 || (sol_to_b < arma::datum::eps) && (result.num_iters <= 2)  // we fastly converged to one bound
      |                                                  ^
      |                    (                                                       )
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:516:31: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare]
  516 |     for (arma::uword i = 0; i < multistart; i++) {
      |                             ~ ^ ~~~~~~~~~~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:826:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
  826 |                          std::move(arma::sqrt(ysd2_n)),
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:826:26: note: remove std::move call here
  826 |                          std::move(arma::sqrt(ysd2_n)),
      |                          ^~~~~~~~~~                  ~
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:829:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
  829 |                          std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones))));
      |                          ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:829:26: note: remove std::move call here
  829 |                          std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones))));
      |                          ^~~~~~~~~~                                                                      ~
[ 79%] Building CXX object src/lib/CMakeFiles/Kriging.dir/lkalloc.cpp.o
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1000:15: warning: unused variable 'd' [-Wunused-variable]
 1000 |   arma::uword d = m_X.n_cols;
      |               ^
/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1004:15: warning: unused variable 'n_on' [-Wunused-variable]
 1004 |   arma::uword n_on = n_o + n_n;
      |               ^~~~
[ 82%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Bench.cpp.o
[ 86%] Building CXX object src/lib/CMakeFiles/Kriging.dir/CacheFunction.cpp.o
[ 89%] Building CXX object src/lib/CMakeFiles/Kriging.dir/utils/base64.cpp.o
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[ 96%] Building CXX object src/lib/CMakeFiles/Kriging.dir/__/__/version.cpp.o
6 warnings generated.
7 warnings generated.
11 warnings generated.
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make[4]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
[100%] Built target install.lib
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'
gmake[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/libK/build'

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Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
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> Rcpp::compileAttributes(pkgdir = '.', verbose = TRUE)
Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/kriging_binding.cpp:
   Rcpp::List new_Kriging(std::string kernel)
   Rcpp::List new_KrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
   void kriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
   Rcpp::List kriging_copy(Rcpp::List k)
   Rcpp::List kriging_model(Rcpp::List k)
   std::string kriging_summary(Rcpp::List k)
   Rcpp::List kriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false)
   arma::mat kriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool will_update = false)
   arma::mat kriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u)
   void kriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true)
   void kriging_save(Rcpp::List k, std::string filename)
   arma::mat kriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2)
   Rcpp::List kriging_logLikelihoodFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool return_hess = false, bool bench = false)
   double kriging_logLikelihood(Rcpp::List k)
   Rcpp::List kriging_leaveOneOutFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false)
   Rcpp::List kriging_leaveOneOutVec(Rcpp::List k, arma::vec theta)
   double kriging_leaveOneOut(Rcpp::List k)
   Rcpp::List kriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false)
   double kriging_logMargPost(Rcpp::List k)
   std::string kriging_kernel(Rcpp::List k)
   std::string kriging_optim(Rcpp::List k)
   std::string kriging_objective(Rcpp::List k)
   arma::mat kriging_X(Rcpp::List k)
   arma::vec kriging_centerX(Rcpp::List k)
   arma::vec kriging_scaleX(Rcpp::List k)
   arma::vec kriging_y(Rcpp::List k)
   double kriging_centerY(Rcpp::List k)
   double kriging_scaleY(Rcpp::List k)
   bool kriging_normalize(Rcpp::List k)
   std::string kriging_regmodel(Rcpp::List k)
   arma::mat kriging_F(Rcpp::List k)
   arma::mat kriging_T(Rcpp::List k)
   arma::mat kriging_M(Rcpp::List k)
   arma::vec kriging_z(Rcpp::List k)
   arma::vec kriging_beta(Rcpp::List k)
   bool kriging_is_beta_estim(Rcpp::List k)
   arma::vec kriging_theta(Rcpp::List k)
   bool kriging_is_theta_estim(Rcpp::List k)
   double kriging_sigma2(Rcpp::List k)
   bool kriging_is_sigma2_estim(Rcpp::List k)

Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/linalg.cpp:
   double linalg_get_num_nugget()
   void linalg_set_num_nugget(double nugget)
   void linalg_check_chol_rcond(bool cr)
   bool linalg_chol_rcond_checked()
   arma::mat linalg_chol_safe(arma::mat X)
   void linalg_set_chol_warning(bool warn)
   double linalg_rcond_approx_chol(arma::mat X)
   double linalg_rcond_chol(arma::mat X)
   arma::mat linalg_chol_block(arma::mat C, arma::mat Loo)

Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/load.cpp:
   Rcpp::List kriging_load(std::string filename)
   Rcpp::List noisekriging_load(std::string filename)
   Rcpp::List nuggetkriging_load(std::string filename)
   std::string class_saved(std::string filename)

Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/noisekriging_binding.cpp:
   Rcpp::List new_NoiseKriging(std::string kernel)
   Rcpp::List new_NoiseKrigingFit(arma::vec y, arma::vec noise, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
   void noisekriging_fit(Rcpp::List k, arma::vec y, arma::vec noise, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
   Rcpp::List noisekriging_copy(Rcpp::List k)
   Rcpp::List noisekriging_model(Rcpp::List k)
   std::string noisekriging_summary(Rcpp::List k)
   Rcpp::List noisekriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false)
   arma::mat noisekriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, arma::vec with_noise, bool will_update = false)
   arma::mat noisekriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u)
   void noisekriging_update(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u, bool refit = true)
   void noisekriging_save(Rcpp::List k, std::string filename)
   arma::mat noisekriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2)
   Rcpp::List noisekriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_sigma2, bool return_grad = false, bool bench = false)
   double noisekriging_logLikelihood(Rcpp::List k)
   std::string noisekriging_kernel(Rcpp::List k)
   std::string noisekriging_optim(Rcpp::List k)
   std::string noisekriging_objective(Rcpp::List k)
   arma::mat noisekriging_X(Rcpp::List k)
   arma::vec noisekriging_centerX(Rcpp::List k)
   arma::vec noisekriging_scaleX(Rcpp::List k)
   arma::vec noisekriging_y(Rcpp::List k)
   arma::vec noisekriging_noise(Rcpp::List k)
   double noisekriging_centerY(Rcpp::List k)
   double noisekriging_scaleY(Rcpp::List k)
   bool noisekriging_normalize(Rcpp::List k)
   std::string noisekriging_regmodel(Rcpp::List k)
   arma::mat noisekriging_F(Rcpp::List k)
   arma::mat noisekriging_T(Rcpp::List k)
   arma::mat noisekriging_M(Rcpp::List k)
   arma::vec noisekriging_z(Rcpp::List k)
   arma::vec noisekriging_beta(Rcpp::List k)
   bool noisekriging_is_beta_estim(Rcpp::List k)
   arma::vec noisekriging_theta(Rcpp::List k)
   bool noisekriging_is_theta_estim(Rcpp::List k)
   double noisekriging_sigma2(Rcpp::List k)
   bool noisekriging_is_sigma2_estim(Rcpp::List k)

Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/nuggetkriging_binding.cpp:
   Rcpp::List new_NuggetKriging(std::string kernel)
   Rcpp::List new_NuggetKrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
   void nuggetkriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
   Rcpp::List nuggetkriging_copy(Rcpp::List k)
   Rcpp::List nuggetkriging_model(Rcpp::List k)
   std::string nuggetkriging_summary(Rcpp::List k)
   Rcpp::List nuggetkriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false)
   arma::mat nuggetkriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool with_nugget = true, bool will_update = false)
   arma::mat nuggetkriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u)
   void nuggetkriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true)
   void nuggetkriging_save(Rcpp::List k, std::string filename)
   arma::mat nuggetkriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2)
   Rcpp::List nuggetkriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_alpha, bool return_grad = false, bool bench = false)
   double nuggetkriging_logLikelihood(Rcpp::List k)
   Rcpp::List nuggetkriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false)
   double nuggetkriging_logMargPost(Rcpp::List k)
   std::string nuggetkriging_kernel(Rcpp::List k)
   std::string nuggetkriging_optim(Rcpp::List k)
   std::string nuggetkriging_objective(Rcpp::List k)
   arma::mat nuggetkriging_X(Rcpp::List k)
   arma::vec nuggetkriging_centerX(Rcpp::List k)
   arma::vec nuggetkriging_scaleX(Rcpp::List k)
   arma::vec nuggetkriging_y(Rcpp::List k)
   double nuggetkriging_centerY(Rcpp::List k)
   double nuggetkriging_scaleY(Rcpp::List k)
   bool nuggetkriging_normalize(Rcpp::List k)
   std::string nuggetkriging_regmodel(Rcpp::List k)
   arma::mat nuggetkriging_F(Rcpp::List k)
   arma::mat nuggetkriging_T(Rcpp::List k)
   arma::mat nuggetkriging_M(Rcpp::List k)
   arma::vec nuggetkriging_z(Rcpp::List k)
   arma::vec nuggetkriging_beta(Rcpp::List k)
   bool nuggetkriging_is_beta_estim(Rcpp::List k)
   arma::vec nuggetkriging_theta(Rcpp::List k)
   bool nuggetkriging_is_theta_estim(Rcpp::List k)
   double nuggetkriging_sigma2(Rcpp::List k)
   bool nuggetkriging_is_sigma2_estim(Rcpp::List k)
   double nuggetkriging_nugget(Rcpp::List k)
   bool nuggetkriging_is_nugget_estim(Rcpp::List k)

Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/optim.cpp:
   bool optim_is_reparametrized()
   void optim_use_reparametrize(bool reparametrize)
   double optim_get_theta_lower_factor()
   void optim_set_theta_lower_factor(double theta_lower_factor)
   double optim_get_theta_upper_factor()
   void optim_set_theta_upper_factor(double theta_upper_factor)
   bool optim_variogram_bounds_heuristic_used()
   void optim_use_variogram_bounds_heuristic(bool variogram_bounds_heuristic)
   void optim_log(int l)
   int optim_get_max_iteration()
   void optim_set_max_iteration(int max_iteration)
   double optim_get_gradient_tolerance()
   void optim_set_gradient_tolerance(double gradient_tolerance)
   double optim_get_objective_rel_tolerance()
   void optim_set_objective_rel_tolerance(double objective_rel_tolerance)

Exports from /data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/random.cpp:
   void random_reset_seed(unsigned int seed)
   double random_randu()
   arma::vec random_randu_vec(unsigned int n)
   arma::mat random_randu_mat(unsigned int n, unsigned int d)
   arma::mat random_randn_mat(unsigned int n, unsigned int d)

/data/gannet/ripley/R/packages/tests-clang/rlibkriging/R/RcppExports.R updated.
> 
** libs
make[1]: warning: -j0 forced in makefile: resetting jobserver mode.
using C++ compiler: ‘clang version 19.1.5’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src'
make[1]: warning: -j0 forced in makefile: resetting jobserver mode.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c kriging_binding.cpp -o kriging_binding.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c linalg.cpp -o linalg.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c load.cpp -o load.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c noisekriging_binding.cpp -o noisekriging_binding.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c nuggetkriging_binding.cpp -o nuggetkriging_binding.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c optim.cpp -o optim.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c random.cpp -o random.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o rlibkriging.so RcppExports.o kriging_binding.o linalg.o load.o noisekriging_binding.o nuggetkriging_binding.o optim.o random.o -fopenmp -L/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src/../inst//lib -lKriging -larmadillo -llbfgsb_cpp /usr/lib64/libflexiblas.so /usr/lib64/libarpack.so /usr/lib64/libsuperlu.so -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src'
make[1]: warning: -j0 forced in makefile: resetting jobserver mode.
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlibkriging/src'
installing to /data/gannet/ripley/R/packages/tests-clang/rlibkriging.Rcheck/00LOCK-rlibkriging/00new/rlibkriging/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rlibkriging)