* installing *source* package ‘rlas’ ...
** package ‘rlas’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlas/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_txt.cpp -o LASlib/lasreader_txt.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/fopen_compressed.cpp -o LASlib/fopen_compressed.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswriter_las.cpp -o LASlib/laswriter_las.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreaderbuffered.cpp -o LASlib/lasreaderbuffered.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreadermerged.cpp -o LASlib/lasreadermerged.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswriter_wrl.cpp -o LASlib/laswriter_wrl.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_shp.cpp -o LASlib/lasreader_shp.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_asc.cpp -o LASlib/lasreader_asc.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreaderstored.cpp -o LASlib/lasreaderstored.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreaderpipeon.cpp -o LASlib/lasreaderpipeon.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_bil.cpp -o LASlib/lasreader_bil.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lastransform.cpp -o LASlib/lastransform.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswaveform13writer.cpp -o LASlib/laswaveform13writer.o
LASlib/lastransform.cpp:794:155: warning: multi-character character constant [-Wmultichar]
794 | inline I32 get_command(CHAR* string) const { return snprintf(string, 256, "-%s%c %u ", name(), (rgbi == 0 ? 'R' : (rgbi == 1 ? 'G' : (rgbi == 2 ? 'B' : 'NIR'))), index); };
| ^
LASlib/lastransform.cpp:1072:155: warning: multi-character character constant [-Wmultichar]
1072 | inline I32 get_command(CHAR* string) const { return snprintf(string, 256, "-%s%c %u ", name(), (rgbi == 0 ? 'R' : (rgbi == 1 ? 'G' : (rgbi == 2 ? 'B' : 'NIR'))), index); };
| ^
2 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswaveform13reader.cpp -o LASlib/laswaveform13reader.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswritercompatible.cpp -o LASlib/laswritercompatible.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasutility.cpp -o LASlib/lasutility.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_dtm.cpp -o LASlib/lasreader_dtm.o
LASlib/lasreader_dtm.cpp:87:29: warning: unused variable 'PCS_NAD83_Kentucky_South' [-Wunused-const-variable]
87 | static const unsigned short PCS_NAD83_Kentucky_South = 26980;
| ^~~~~~~~~~~~~~~~~~~~~~~~
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasfilter.cpp -o LASlib/lasfilter.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasignore.cpp -o LASlib/lasignore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laskdtree.cpp -o LASlib/laskdtree.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswriter_qfit.cpp -o LASlib/laswriter_qfit.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_qfit.cpp -o LASlib/lasreader_qfit.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswriter.cpp -o LASlib/laswriter.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader.cpp -o LASlib/lasreader.o
In file included from LASlib/laswriter.cpp:31:
LASlib/laswriter.hpp:136:8: warning: private field 'buffered' is not used [-Wunused-private-field]
136 | BOOL buffered;
| ^
1 warning generated.
LASlib/lasreader.cpp:469:7: warning: variable 'inrect' set but not used [-Wunused-but-set-variable]
469 | bool inrect;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_las.cpp -o LASlib/lasreader_las.o
LASlib/lasreader_las.cpp:947:13: warning: variable 'evlrs_size' set but not used [-Wunused-but-set-variable]
947 | I64 evlrs_size = 0;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_ply.cpp -o LASlib/lasreader_ply.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/lasreader_bin.cpp -o LASlib/lasreader_bin.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswriter_bin.cpp -o LASlib/laswriter_bin.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASlib/laswriter_txt.cpp -o LASlib/laswriter_txt.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/laszip.cpp -o LASzip/laszip.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasindex.cpp -o LASzip/lasindex.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/arithmeticmodel.cpp -o LASzip/arithmeticmodel.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/laswriteitemcompressed_v1.cpp -o LASzip/laswriteitemcompressed_v1.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/laswriteitemcompressed_v2.cpp -o LASzip/laswriteitemcompressed_v2.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/laswriteitemcompressed_v3.cpp -o LASzip/laswriteitemcompressed_v3.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/laswriteitemcompressed_v4.cpp -o LASzip/laswriteitemcompressed_v4.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasreaditemcompressed_v1.cpp -o LASzip/lasreaditemcompressed_v1.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasreaditemcompressed_v2.cpp -o LASzip/lasreaditemcompressed_v2.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasreaditemcompressed_v3.cpp -o LASzip/lasreaditemcompressed_v3.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasreaditemcompressed_v4.cpp -o LASzip/lasreaditemcompressed_v4.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/arithmeticdecoder.cpp -o LASzip/arithmeticdecoder.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/arithmeticencoder.cpp -o LASzip/arithmeticencoder.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasquadtree.cpp -o LASzip/lasquadtree.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/laswritepoint.cpp -o LASzip/laswritepoint.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasreadpoint.cpp -o LASzip/lasreadpoint.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/integercompressor.cpp -o LASzip/integercompressor.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lasinterval.cpp -o LASzip/lasinterval.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c LASzip/lascopc.cpp -o LASzip/lascopc.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c altrep_compact_replication.cpp -o altrep_compact_replication.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c rlasstreamer.cpp -o rlasstreamer.o
In file included from rlasstreamer.cpp:1:
In file included from ./rlasstreamer.h:5:
In file included from ./LASlib/lasreader.hpp:55:
In file included from ./LASlib/lasdefinitions.hpp:60:
./LASzip/mydefs.hpp:38:9: warning: '__STDC_FORMAT_MACROS' macro redefined [-Wmacro-redefined]
38 | #define __STDC_FORMAT_MACROS 1
| ^
/usr/local/clang19/bin/../include/c++/v1/inttypes.h:248:11: note: previous definition is here
248 | # define __STDC_FORMAT_MACROS
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c rlasextrabytesattributes.cpp -o rlasextrabytesattributes.o
In file included from rlasextrabytesattributes.cpp:1:
In file included from ./rlasextrabytesattributes.h:5:
In file included from ./LASlib/lasreader.hpp:55:
In file included from ./LASlib/lasdefinitions.hpp:60:
./LASzip/mydefs.hpp:38:9: warning: '__STDC_FORMAT_MACROS' macro redefined [-Wmacro-redefined]
38 | #define __STDC_FORMAT_MACROS 1
| ^
/usr/local/clang19/bin/../include/c++/v1/inttypes.h:248:11: note: previous definition is here
248 | # define __STDC_FORMAT_MACROS
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c readLAS.cpp -o readLAS.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c readheader.cpp -o readheader.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c writeLAS.cpp -o writeLAS.o
In file included from readLAS.cpp:31:
In file included from ./rlasstreamer.h:5:
In file included from ./LASlib/lasreader.hpp:55:
In file included from ./LASlib/lasdefinitions.hpp:60:
./LASzip/mydefs.hpp:38:9: warning: '__STDC_FORMAT_MACROS' macro redefined [-Wmacro-redefined]
38 | #define __STDC_FORMAT_MACROS 1
| ^
/usr/local/clang19/bin/../include/c++/v1/inttypes.h:248:11: note: previous definition is here
248 | # define __STDC_FORMAT_MACROS
| ^
In file included from readheader.cpp:36:
In file included from ./LASlib/lasreader.hpp:55:
In file included from ./LASlib/lasdefinitions.hpp:60:
./LASzip/mydefs.hpp:38:9: warning: '__STDC_FORMAT_MACROS' macro redefined [-Wmacro-redefined]
38 | #define __STDC_FORMAT_MACROS 1
| ^
/usr/local/clang19/bin/../include/c++/v1/inttypes.h:248:11: note: previous definition is here
248 | # define __STDC_FORMAT_MACROS
| ^
In file included from writeLAS.cpp:4:
In file included from ./LASlib/laswriter.hpp:48:
In file included from ./LASlib/lasdefinitions.hpp:60:
./LASzip/mydefs.hpp:38:9: warning: '__STDC_FORMAT_MACROS' macro redefined [-Wmacro-redefined]
38 | #define __STDC_FORMAT_MACROS 1
| ^
/usr/local/clang19/bin/../include/c++/v1/inttypes.h:248:11: note: previous definition is here
248 | # define __STDC_FORMAT_MACROS
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c writeLAX.cpp -o writeLAX.o
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c fast.cpp -o fast.o
In file included from writeLAX.cpp:40:
In file included from ./LASlib/lasreader.hpp:55:
In file included from ./LASlib/lasdefinitions.hpp:60:
./LASzip/mydefs.hpp:38:9: warning: '__STDC_FORMAT_MACROS' macro redefined [-Wmacro-redefined]
38 | #define __STDC_FORMAT_MACROS 1
| ^
/usr/local/clang19/bin/../include/c++/v1/inttypes.h:248:11: note: previous definition is here
248 | # define __STDC_FORMAT_MACROS
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNDEBUG -DUNORDERED -DHAVE_UNORDERED_MAP -I./ -I./LASlib/ -I./LASzip/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o rlas.so LASlib/lasreader_txt.o LASlib/fopen_compressed.o LASlib/laswriter_las.o LASlib/lasreaderbuffered.o LASlib/lasreadermerged.o LASlib/laswriter_wrl.o LASlib/lasreader_shp.o LASlib/lasreader_asc.o LASlib/lasreaderstored.o LASlib/lasreaderpipeon.o LASlib/lasreader_bil.o LASlib/lastransform.o LASlib/laswaveform13writer.o LASlib/laswaveform13reader.o LASlib/laswritercompatible.o LASlib/lasutility.o LASlib/lasreader_dtm.o LASlib/lasfilter.o LASlib/lasignore.o LASlib/laskdtree.o LASlib/laswriter_qfit.o LASlib/lasreader_qfit.o LASlib/laswriter.o LASlib/lasreader.o LASlib/lasreader_las.o LASlib/lasreader_ply.o LASlib/lasreader_bin.o LASlib/laswriter_bin.o LASlib/laswriter_txt.o LASzip/laszip.o LASzip/lasindex.o LASzip/arithmeticmodel.o LASzip/laswriteitemcompressed_v1.o LASzip/laswriteitemcompressed_v2.o LASzip/laswriteitemcompressed_v3.o LASzip/laswriteitemcompressed_v4.o LASzip/lasreaditemcompressed_v1.o LASzip/lasreaditemcompressed_v2.o LASzip/lasreaditemcompressed_v3.o LASzip/lasreaditemcompressed_v4.o LASzip/arithmeticdecoder.o LASzip/arithmeticencoder.o LASzip/lasquadtree.o LASzip/laswritepoint.o LASzip/lasreadpoint.o LASzip/integercompressor.o LASzip/lasinterval.o LASzip/lascopc.o ./altrep_compact_replication.o ./rlasstreamer.o ./rlasextrabytesattributes.o ./readLAS.o ./readheader.o ./writeLAS.o ./writeLAX.o ./fast.o ./RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlas/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rlas/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rlas/src'
installing to /data/gannet/ripley/R/packages/tests-clang/rlas.Rcheck/00LOCK-rlas/00new/rlas/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rlas)