* installing *source* package ‘portvine’ ...
** package ‘portvine’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/portvine/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/kde1d/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppThread/include' -I'/data/gannet/ripley/R/test-clang/rvinecopulib/include' -I'/data/gannet/ripley/R/test-clang/wdm/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/kde1d/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppThread/include' -I'/data/gannet/ripley/R/test-clang/rvinecopulib/include' -I'/data/gannet/ripley/R/test-clang/wdm/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c dvinecond.cpp -o dvinecond.o
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread.h:9:
/data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
10 | #define R_NO_REMAP
| ^
<command line>:2:9: note: previous definition is here
2 | #define R_NO_REMAP 1
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:18:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_interface.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread.h:9:
/data/gannet/ripley/R/test-clang/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
10 | #define R_NO_REMAP
| ^
<command line>:2:9: note: previous definition is here
2 | #define R_NO_REMAP 1
| ^
6 warnings generated.
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:10:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb6.hpp:46:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/bb6.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_integration.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from dvinecond.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib-wrappers.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/class.hpp:161:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/class.ipp:8:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/abstract.hpp:114:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/abstract.ipp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/bb1.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/archimedean.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/parametric.hpp:68:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/bicop/implementation/parametric.ipp:9:
In file included from /data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_stats.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/math/distributions.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/math/distributions/beta.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/beta.hpp:1721:
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/ibeta_inverse.hpp:29:15: warning: unused variable 'x_extrema' [-Wunused-variable]
29 | const T x_extrema = 1 / (1 + a);
| ^~~~~~~~~
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/ibeta_inverse.hpp:304:7: note: in instantiation of member function 'boost::math::detail::temme_root_finder<double>::temme_root_finder' requested here
304 | temme_root_finder<T>(-lu, alpha), x, lower, upper, policies::digits<T, Policy>() / 2);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/ibeta_inverse.hpp:615:20: note: in instantiation of function template specialization 'boost::math::detail::temme_method_2_ibeta_inverse<double, boost::math::policies::policy<detail::forwarding_arg1, detail::forwarding_arg2, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
615 | x = temme_method_2_ibeta_inverse(a, b, p, r, theta, pol);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/ibeta_inverse.hpp:992:17: note: in instantiation of function template specialization 'boost::math::detail::ibeta_inv_imp<double, boost::math::policies::policy<detail::forwarding_arg1, detail::forwarding_arg2, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
992 | rx = detail::ibeta_inv_imp(
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/t_distribution_inv.hpp:439:8: note: in instantiation of function template specialization 'boost::math::ibeta_inv<double, double, double, double, boost::math::policies::policy<default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
439 | x = ibeta_inv(df / 2, T(0.5), 2 * probability, &y, pol);
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/t_distribution_inv.hpp:458:35: note: in instantiation of function template specialization 'boost::math::detail::fast_students_t_quantile_imp<double, boost::math::policies::policy<default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
458 | return boost::math::detail::fast_students_t_quantile_imp(df, p, pol, static_cast<std::false_type*>(nullptr));
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/math/special_functions/detail/t_distribution_inv.hpp:541:66: note: in instantiation of function template specialization 'boost::math::detail::fast_students_t_quantile_imp<double, boost::math::policies::policy<default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
541 | return policies::checked_narrowing_cast<T, forwarding_policy>(fast_students_t_quantile_imp(static_cast<value_type>(df), static_cast<value_type>(p), pol, static_cast<tag_type*>(nullptr)), "boost::math::students_t_quantile<%1%>(%1%,%1%,%1%)");
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/math/distributions/students_t.hpp:262:32: note: in instantiation of function template specialization 'boost::math::detail::fast_students_t_quantile<double, boost::math::policies::policy<default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
262 | return boost::math::detail::fast_students_t_quantile(df, probability, Policy());
| ^
/data/gannet/ripley/R/test-clang/rvinecopulib/include/vinecopulib/misc/tools_stats.hpp:93:52: note: in instantiation of function template specialization 'boost::math::quantile<double, boost::math::policies::policy<default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy, default_policy>>' requested here
93 | auto f = [&dist](double y) { return boost::math::quantile(dist, y); };
| ^
15 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o portvine.so RcppExports.o dvinecond.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/portvine/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/portvine/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/portvine/src'
installing to /data/gannet/ripley/R/packages/tests-clang/portvine.Rcheck/00LOCK-portvine/00new/portvine/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (portvine)