- using R Under development (unstable) (2024-12-20 r87452)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 19.1.5
flang-new version 19.1.5
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘pems.utils/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘pems.utils’ version ‘0.2.29.1’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘pems.utils’ can be installed ... [43s/52s] OK
See the install log for details.
- used C++ compiler: ‘clang version 19.1.5’
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [56s/58s] OK
- checking Rd files ... NOTE
checkRd: (-1) 5.1.pems.plots.Rd:212: Lost braces; missing escapes or markup?
212 | (Logical or character) For {WatsonPlot}, how to
| ^
checkRd: (-1) 5.1.pems.plots.Rd:221: Lost braces; missing escapes or markup?
221 | (numeric) For {WatsonPlot}, pre-set plot types:
| ^
checkRd: (-1) 6.2.check.functions.Rd:189: Lost braces
189 | If a parent function is identified as \code{fun.name} and the check case (code{input},
| ^
checkRd: (-1) 7.1.vsp.code.Rd:89: Lost braces
89 | code{\link{common.calculations}} for further details.
| ^
checkRd: (-1) 7.2.emissions.code.Rd:90: Lost braces
90 | emissions calculation methods. It accepts an input code{conc} which it checks and passes
| ^
checkRd: (-1) 8.1.tidyverse.tools.Rd:139: Lost braces
139 | (\code{pems}, code{data.frame}, etc) to
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... OK
- checking PDF version of manual ... [13s/15s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE