* installing *source* package ‘npsf’ ...
** package ‘npsf’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.5’
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/npsf/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c radial.cpp -o radial.o
radial.cpp:140:7: warning: variable 'nrow' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
140 | if (*rts == 3){
| ^~~~~~~~~
radial.cpp:145:11: note: uninitialized use occurs here
145 | int ne = nrow * ncol;
| ^~~~
radial.cpp:140:3: note: remove the 'if' if its condition is always true
140 | if (*rts == 3){
| ^~~~~~~~~~~~~~
radial.cpp:136:10: note: initialize the variable 'nrow' to silence this warning
136 | int nrow;
| ^
| = 0
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c nonradial.cpp -o nonradial.o
nonradial.cpp:140:8: warning: variable 'nrow' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
140 | if (*rts == 3){
| ^~~~~~~~~
nonradial.cpp:144:17: note: uninitialized use occurs here
144 | yxRTSlength = nrow;
| ^~~~
nonradial.cpp:140:4: note: remove the 'if' if its condition is always true
140 | if (*rts == 3){
| ^~~~~~~~~~~~~~
nonradial.cpp:136:11: note: initialize the variable 'nrow' to silence this warning
136 | int nrow, ncol1, yxRTSlength;
| ^
| = 0
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c nllpk/routines.cpp -o nllpk/routines.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c nllpk/simplexMethod.cpp -o nllpk/simplexMethod.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c fourcomp.c -o fourcomp.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c halton.c -o halton.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o npsf.so radial.o nonradial.o nllpk/routines.o nllpk/simplexMethod.o init.o fourcomp.o halton.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/npsf/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/npsf/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/npsf/src'
installing to /data/gannet/ripley/R/packages/tests-clang/npsf.Rcheck/00LOCK-npsf/00new/npsf/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (npsf)