* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/nlmixr2lib.Rcheck’
* using R Under development (unstable) (2025-03-01 r87852)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 20.1.0-rc3
    flang version 20.1.0-rc3
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘nlmixr2lib/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘nlmixr2lib’ version ‘0.3.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘nlmixr2lib’ can be installed ... [14s/37s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/nlmixr2lib-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
  Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘addBaseline1exp.Rd’ ‘addBaselineConst.Rd’ ‘addBaselineExp.Rd’
    ‘addBaselineLin.Rd’ ‘addCmtProp.Rd’ ‘addDepot.Rd’ ‘addDirectLin.Rd’
    ‘addEffectCmtLin.Rd’ ‘addEta.Rd’ ‘addIndirect.Rd’ ‘addIndirectLin.Rd’
    ‘addLogEstimates.Rd’ ‘addResErr.Rd’ ‘addTransit.Rd’
    ‘addWeibullAbs.Rd’ ‘convertEmax.Rd’ ‘convertEmaxHill.Rd’
    ‘convertKinR0.Rd’ ‘convertLogLin.Rd’ ‘convertMM.Rd’ ‘convertQuad.Rd’
    ‘fakeCc.Rd’ ‘pkTrans.Rd’ ‘removeDepot.Rd’ ‘removeLinesAndInis.Rd’
    ‘removeTransit.Rd’
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [27s/73s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [95s/253s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [10m/20m] OK
  Running ‘testthat.R’ [10m/20m]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE