* installing *source* package ‘nanoarrow’ ...
** package ‘nanoarrow’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.6’
using C++ compiler: ‘clang version 19.1.6’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/nanoarrow/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c altrep.c -o altrep.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c array.c -o array.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c array_stream.c -o array_stream.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c array_view.c -o array_view.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c as_array.c -o as_array.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c buffer.c -o buffer.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c convert.c -o convert.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c convert_array.c -o convert_array.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c convert_array_stream.c -o convert_array_stream.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c flatcc.c -o flatcc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c infer_ptype.c -o infer_ptype.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ipc.c -o ipc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c materialize.c -o materialize.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c nanoarrow.c -o nanoarrow.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c nanoarrow_cpp.cc -o nanoarrow_cpp.o
nanoarrow_cpp.cc:18:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
18 | #define R_NO_REMAP
| ^
<command line>:3:9: note: previous definition is here
3 | #define R_NO_REMAP 1
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c nanoarrow_ipc.c -o nanoarrow_ipc.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c pointers.c -o pointers.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c schema.c -o schema.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c util.c -o util.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c vctr.c -o vctr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -I../src -DFLATCC_USE_GENERIC_ALIGNED_ALLOC -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c version.c -o version.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o nanoarrow.so altrep.o array.o array_stream.o array_view.o as_array.o buffer.o convert.o convert_array.o convert_array_stream.o flatcc.o infer_ptype.o init.o ipc.o materialize.o nanoarrow.o nanoarrow_cpp.o nanoarrow_ipc.o pointers.o schema.o util.o vctr.o version.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/nanoarrow/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/nanoarrow/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/nanoarrow/src'
installing to /data/gannet/ripley/R/packages/tests-clang/nanoarrow.Rcheck/00LOCK-nanoarrow/00new/nanoarrow/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (nanoarrow)