* installing *source* package ‘multinet’ ...
** package ‘multinet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/multinet/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c init.cpp -o init.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c r_functions.cpp -o r_functions.o
In file included from r_functions.cpp:8:
In file included from src/community/abacus.hpp:30:
In file included from src/community/abacus.ipp:11:
In file included from src/community/_impl/abacus_utils.hpp:15:
In file included from eclat/eclat/src/eclat.h:15:
In file included from eclat/tract/src/report.h:57:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from r_functions.cpp:8:
In file included from src/community/abacus.hpp:30:
In file included from src/community/abacus.ipp:11:
In file included from src/community/_impl/abacus_utils.hpp:15:
In file included from eclat/eclat/src/eclat.h:15:
In file included from eclat/tract/src/report.h:57:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c rcpp_module_definition.cpp -o rcpp_module_definition.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c rcpp_utils.cpp -o rcpp_utils.o
In file included from r_functions.cpp:13:
In file included from src/community/modularity.hpp:47:
src/community/modularity.ipp:149:15: warning: unused variable 'actor' [-Wunused-variable]
149 | for (auto actor: *mnet->actors())
| ^~~~~
r_functions.cpp:3233:21: note: in instantiation of function template specialization 'uu::net::modularity<uu::net::MultilayerNetwork, uu::net::CommunityStructure<uu::net::MultilayerNetwork>>' requested here
3233 | return uu::net::modularity(mnet, communities.get(), omega);
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/community/_impl/common.cpp -o src/community/_impl/common.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/community/_impl/glouvain2_utils.cpp -o src/community/_impl/glouvain2_utils.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/community/_impl/MetaNetwork.cpp -o src/community/_impl/MetaNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/community/_impl/GMetaNetwork.cpp -o src/community/_impl/GMetaNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/community/_impl/louvain_utils.cpp -o src/community/_impl/louvain_utils.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/community/optimize_slices.cpp -o src/community/optimize_slices.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/objects/Object.cpp -o src/core/objects/Object.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/utils/random.cpp -o src/core/utils/random.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/utils/NameIterator.cpp -o src/core/utils/NameIterator.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/utils/string.cpp -o src/core/utils/string.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/utils/CSVReader.cpp -o src/core/utils/CSVReader.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/utils/vector.cpp -o src/core/utils/vector.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/NullPtrException.cpp -o src/core/exceptions/NullPtrException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/FileNotFoundException.cpp -o src/core/exceptions/FileNotFoundException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/assert_not_null.cpp -o src/core/exceptions/assert_not_null.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/DuplicateElementException.cpp -o src/core/exceptions/DuplicateElementException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/ExternalLibException.cpp -o src/core/exceptions/ExternalLibException.o
6 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/ElementNotFoundException.cpp -o src/core/exceptions/ElementNotFoundException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/OutOfBoundsException.cpp -o src/core/exceptions/OutOfBoundsException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/OperationNotSupportedException.cpp -o src/core/exceptions/OperationNotSupportedException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/WrongParameterException.cpp -o src/core/exceptions/WrongParameterException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/exceptions/WrongFormatException.cpp -o src/core/exceptions/WrongFormatException.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/attributes/Text.cpp -o src/core/attributes/Text.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/attributes/Attribute.cpp -o src/core/attributes/Attribute.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/attributes/conversion.cpp -o src/core/attributes/conversion.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/attributes/AttributeType.cpp -o src/core/attributes/AttributeType.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/attributes/Time.cpp -o src/core/attributes/Time.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/core/observers/ObserverStore.cpp -o src/core/observers/ObserverStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/generation/communities.cpp -o src/generation/communities.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/generation/erdos_renyi.cpp -o src/generation/erdos_renyi.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/generation/standard_graphs.cpp -o src/generation/standard_graphs.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/_impl/parser/mlpass2/parser.cpp -o src/io/_impl/parser/mlpass2/parser.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/_impl/parser/mlpass1/utility_functions.cpp -o src/io/_impl/parser/mlpass1/utility_functions.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/_impl/parser/mlpass1/parser.cpp -o src/io/_impl/parser/mlpass1/parser.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/_impl/read_common.cpp -o src/io/_impl/read_common.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/_impl/GraphIOFileSection.cpp -o src/io/_impl/GraphIOFileSection.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/read_network.cpp -o src/io/read_network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/write_multilayer_network.cpp -o src/io/write_multilayer_network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/read_probabilistic_network.cpp -o src/io/read_probabilistic_network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/read_weighted_network.cpp -o src/io/read_weighted_network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/read_multilayer_network.cpp -o src/io/read_multilayer_network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/io/read_temporal_network.cpp -o src/io/read_temporal_network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/layout/multiforce.cpp -o src/layout/multiforce.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/MultilayerNetwork.cpp -o src/networks/MultilayerNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/Network.cpp -o src/networks/Network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/stores/LayerStore.cpp -o src/networks/_impl/stores/LayerStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/stores/MLECubeStore.cpp -o src/networks/_impl/stores/MLECubeStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/stores/VertexStore.cpp -o src/networks/_impl/stores/VertexStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/stores/SimpleEdgeStore.cpp -o src/networks/_impl/stores/SimpleEdgeStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/stores/MultiEdgeStore.cpp -o src/networks/_impl/stores/MultiEdgeStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/stores/EdgeStore.cpp -o src/networks/_impl/stores/EdgeStore.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/observers/CheckVerticesExistObserver.cpp -o src/networks/_impl/observers/CheckVerticesExistObserver.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/_impl/observers/NoLoopCheckObserver2.cpp -o src/networks/_impl/observers/NoLoopCheckObserver2.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/OrderedMultiplexNetwork.cpp -o src/networks/OrderedMultiplexNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/MultiNetwork.cpp -o src/networks/MultiNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/weight.cpp -o src/networks/weight.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/probability.cpp -o src/networks/probability.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/networks/time.cpp -o src/networks/time.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Dyad.cpp -o src/objects/Dyad.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Walk.cpp -o src/objects/Walk.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Triad.cpp -o src/objects/Triad.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Path.cpp -o src/objects/Path.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/MLVertex.cpp -o src/objects/MLVertex.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Trail.cpp -o src/objects/Trail.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Vertex.cpp -o src/objects/Vertex.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/objects/Edge.cpp -o src/objects/Edge.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/MECube.cpp -o src/olap/MECube.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/indexing.cpp -o src/olap/indexing.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/VCube.cpp -o src/olap/VCube.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/sel/Indexes.cpp -o src/olap/sel/Indexes.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/sel/Range.cpp -o src/olap/sel/Range.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/sel/Set.cpp -o src/olap/sel/Set.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/sel/All.cpp -o src/olap/sel/All.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/sel/IndexIterator.cpp -o src/olap/sel/IndexIterator.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/ECube.cpp -o src/olap/ECube.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/olap/time.cpp -o src/olap/time.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/operations/slice.cpp -o src/operations/slice.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/operations/sample.cpp -o src/operations/sample.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c src/utils/summary.cpp -o src/utils/summary.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/Network.cpp -o infomap/infomap/Network.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/FlowNetwork.cpp -o infomap/infomap/FlowNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/Node.cpp -o infomap/infomap/Node.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/TreeData.cpp -o infomap/infomap/TreeData.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/InfomapContext.cpp -o infomap/infomap/InfomapContext.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/NetworkAdapter.cpp -o infomap/infomap/NetworkAdapter.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/MultiplexNetwork.cpp -o infomap/infomap/MultiplexNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/MemoryNetworkAdapter.cpp -o infomap/infomap/MemoryNetworkAdapter.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/MemNetwork.cpp -o infomap/infomap/MemNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/MemFlowNetwork.cpp -o infomap/infomap/MemFlowNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/infomap/InfomapBase.cpp -o infomap/infomap/InfomapBase.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/io/HierarchicalNetwork.cpp -o infomap/io/HierarchicalNetwork.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/io/TreeDataWriter.cpp -o infomap/io/TreeDataWriter.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/io/BipartiteClusterReader.cpp -o infomap/io/BipartiteClusterReader.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/io/version.cpp -o infomap/io/version.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/io/ClusterReader.cpp -o infomap/io/ClusterReader.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/io/ProgramInterface.cpp -o infomap/io/ProgramInterface.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/utils/FileURI.cpp -o infomap/utils/FileURI.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c infomap/utils/Logger.cpp -o infomap/utils/Logger.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/apriori/src/istree.c -o eclat/apriori/src/istree.o
In file included from eclat/apriori/src/istree.c:101:
In file included from eclat/apriori/src/istree.h:51:
In file included from eclat/math/src/ruleval.h:12:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/apriori/src/istree.c:101:
In file included from eclat/apriori/src/istree.h:51:
In file included from eclat/math/src/ruleval.h:12:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
eclat/apriori/src/istree.c:127:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
127 | #define int 1 /* to check definition of SUPP */
| ^
eclat/apriori/src/istree.c:128:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
128 | #define long 2 /* for double precision type */
| ^
eclat/apriori/src/istree.c:129:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
129 | #define double 3
| ^
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/eclat/src/eclat.c -o eclat/eclat/src/eclat.o
In file included from eclat/eclat/src/eclat.c:152:
In file included from eclat/eclat/src/eclat.h:15:
In file included from eclat/tract/src/report.h:52:
In file included from eclat/tract/src/patspec.h:17:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/eclat/src/eclat.c:152:
In file included from eclat/eclat/src/eclat.h:15:
In file included from eclat/tract/src/report.h:52:
In file included from eclat/tract/src/patspec.h:17:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
In file included from eclat/eclat/src/eclat.c:152:
In file included from eclat/eclat/src/eclat.h:15:
In file included from eclat/tract/src/report.h:55:
eclat/tract/src/clomax.h:37:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
37 | #define int 1 /* to check definition of RSUPP */
| ^
eclat/tract/src/clomax.h:38:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
38 | #define long 2 /* for certain types */
| ^
eclat/tract/src/clomax.h:40:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
40 | #define double 4
| ^
In file included from eclat/eclat/src/eclat.c:152:
In file included from eclat/eclat/src/eclat.h:15:
eclat/tract/src/report.h:69:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
69 | #define int 1 /* to check definition of RSUPP */
| ^
eclat/tract/src/report.h:70:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
70 | #define long 2 /* for certain types */
| ^
eclat/tract/src/report.h:72:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
72 | #define double 4
| ^
8 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/math/src/chi2.c -o eclat/math/src/chi2.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/math/src/gamma.c -o eclat/math/src/gamma.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/math/src/ruleval.c -o eclat/math/src/ruleval.o
In file included from eclat/math/src/ruleval.c:17:
In file included from eclat/math/src/ruleval.h:12:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/math/src/ruleval.c:17:
In file included from eclat/math/src/ruleval.h:12:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
5 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/tract/src/report.c -o eclat/tract/src/report.o
In file included from eclat/tract/src/report.c:83:
In file included from eclat/tract/src/report.h:57:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/tract/src/report.c:83:
In file included from eclat/tract/src/report.h:57:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
11 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/tract/src/tract.c -o eclat/tract/src/tract.o
eclat/tract/src/report.c:3120:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
3120 | #define int 1
| ^
eclat/tract/src/report.c:3121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
3121 | #define double 2
| ^
eclat/tract/src/report.c:3266:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
3266 | #define int 1
| ^
eclat/tract/src/report.c:3267:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
3267 | #define double 2
| ^
eclat/tract/src/report.c:3422:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
3422 | #define int 1
| ^
eclat/tract/src/report.c:3423:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
3423 | #define double 2
| ^
In file included from eclat/tract/src/tract.c:103:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/tract/src/tract.c:103:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
eclat/tract/src/tract.c:664:38: warning: format specifies type 'void *' but the argument has type 'const char *' [-Wformat-pedantic]
664 | snprintf(buf, sizeof(buf), "%p", ib_name(base, item));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
| %s
eclat/tract/src/tract.h:1027:27: note: expanded from macro 'ib_name'
1027 | #define ib_name(s,i) idm_name(idm_byid((s)->idmap, i))
| ^
eclat/util/src/symtab.h:262:27: note: expanded from macro 'idm_name'
262 | #define idm_name(d) st_name(d)
| ^
eclat/util/src/symtab.h:251:27: note: expanded from macro 'st_name'
251 | #define st_name(d) ((const char*)((STE*)(d)-1)->key)
| ^
/usr/include/bits/stdio2.h:61:31: note: expanded from macro 'snprintf'
61 | __glibc_objsize (str), __VA_ARGS__)
| ^~~~~~~~~~~
11 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/tract/src/patspec.c -o eclat/tract/src/patspec.o
In file included from eclat/tract/src/patspec.c:30:
In file included from eclat/tract/src/patspec.h:17:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/tract/src/patspec.c:30:
In file included from eclat/tract/src/patspec.h:17:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
eclat/tract/src/patspec.c:51:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
51 | #define int 1 /* to check definition */
| ^
eclat/tract/src/patspec.c:52:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
52 | #define long 2 /* of support type */
| ^
eclat/tract/src/patspec.c:54:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
54 | #define double 4
| ^
8 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/tract/src/fim16.c -o eclat/tract/src/fim16.o
In file included from eclat/tract/src/fim16.c:49:
In file included from eclat/tract/src/fim16.h:16:
In file included from eclat/tract/src/report.h:55:
In file included from eclat/tract/src/clomax.h:21:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/tract/src/fim16.c:49:
In file included from eclat/tract/src/fim16.h:16:
In file included from eclat/tract/src/report.h:55:
In file included from eclat/tract/src/clomax.h:21:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
In file included from eclat/tract/src/fim16.c:49:
In file included from eclat/tract/src/fim16.h:16:
eclat/tract/src/report.h:69:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
69 | #define int 1 /* to check definition of RSUPP */
| ^
eclat/tract/src/report.h:70:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
70 | #define long 2 /* for certain types */
| ^
eclat/tract/src/report.h:72:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
72 | #define double 4
| ^
8 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/tract/src/clomax.c -o eclat/tract/src/clomax.o
6 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/scanner.c -o eclat/util/src/scanner.o
In file included from eclat/tract/src/clomax.c:29:
In file included from eclat/tract/src/clomax.h:21:
In file included from eclat/tract/src/tract.h:81:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
In file included from eclat/tract/src/clomax.c:29:
In file included from eclat/tract/src/clomax.h:21:
eclat/tract/src/tract.h:118:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
118 | #define int 1 /* to check definitions */
| ^
eclat/tract/src/tract.h:119:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
119 | #define long 2 /* for certain types */
| ^
eclat/tract/src/tract.h:121:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
121 | #define double 4
| ^
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/arrays.c -o eclat/util/src/arrays.o
5 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/escape.c -o eclat/util/src/escape.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/memsys.c -o eclat/util/src/memsys.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/tabread.c -o eclat/util/src/tabread.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/tabwrite.c -o eclat/util/src/tabwrite.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c eclat/util/src/symtab.c -o eclat/util/src/symtab.o
In file included from eclat/util/src/symtab.c:39:
eclat/util/src/symtab.h:41:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
41 | #define int 1 /* to check definition of IDENT */
| ^
eclat/util/src/symtab.h:42:9: warning: keyword is hidden by macro definition [-Wkeyword-macro]
42 | #define long 2 /* for certain types */
| ^
2 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o multinet.so RcppExports.o init.o r_functions.o rcpp_module_definition.o rcpp_utils.o src/community/_impl/common.o src/community/_impl/glouvain2_utils.o src/community/_impl/MetaNetwork.o src/community/_impl/GMetaNetwork.o src/community/_impl/louvain_utils.o src/community/optimize_slices.o src/core/objects/Object.o src/core/utils/random.o src/core/utils/NameIterator.o src/core/utils/string.o src/core/utils/CSVReader.o src/core/utils/vector.o src/core/exceptions/NullPtrException.o src/core/exceptions/FileNotFoundException.o src/core/exceptions/assert_not_null.o src/core/exceptions/DuplicateElementException.o src/core/exceptions/ExternalLibException.o src/core/exceptions/ElementNotFoundException.o src/core/exceptions/OutOfBoundsException.o src/core/exceptions/OperationNotSupportedException.o src/core/exceptions/WrongParameterException.o src/core/exceptions/WrongFormatException.o src/core/attributes/Text.o src/core/attributes/Attribute.o src/core/attributes/conversion.o src/core/attributes/AttributeType.o src/core/attributes/Time.o src/core/observers/ObserverStore.o src/generation/communities.o src/generation/erdos_renyi.o src/generation/standard_graphs.o src/io/_impl/parser/mlpass2/parser.o src/io/_impl/parser/mlpass1/utility_functions.o src/io/_impl/parser/mlpass1/parser.o src/io/_impl/read_common.o src/io/_impl/GraphIOFileSection.o src/io/read_network.o src/io/write_multilayer_network.o src/io/read_probabilistic_network.o src/io/read_weighted_network.o src/io/read_multilayer_network.o src/io/read_temporal_network.o src/layout/multiforce.o src/networks/MultilayerNetwork.o src/networks/Network.o src/networks/_impl/stores/LayerStore.o src/networks/_impl/stores/MLECubeStore.o src/networks/_impl/stores/VertexStore.o src/networks/_impl/stores/SimpleEdgeStore.o src/networks/_impl/stores/MultiEdgeStore.o src/networks/_impl/stores/EdgeStore.o src/networks/_impl/observers/CheckVerticesExistObserver.o src/networks/_impl/observers/NoLoopCheckObserver2.o src/networks/OrderedMultiplexNetwork.o src/networks/MultiNetwork.o src/networks/weight.o src/networks/probability.o src/networks/time.o src/objects/Dyad.o src/objects/Walk.o src/objects/Triad.o src/objects/Path.o src/objects/MLVertex.o src/objects/Trail.o src/objects/Vertex.o src/objects/Edge.o src/olap/MECube.o src/olap/indexing.o src/olap/VCube.o src/olap/sel/Indexes.o src/olap/sel/Range.o src/olap/sel/Set.o src/olap/sel/All.o src/olap/sel/IndexIterator.o src/olap/ECube.o src/olap/time.o src/operations/slice.o src/operations/sample.o src/utils/summary.o infomap/infomap/Network.o infomap/infomap/FlowNetwork.o infomap/infomap/Node.o infomap/infomap/TreeData.o infomap/infomap/InfomapContext.o infomap/infomap/NetworkAdapter.o infomap/infomap/MultiplexNetwork.o infomap/infomap/MemoryNetworkAdapter.o infomap/infomap/MemNetwork.o infomap/infomap/MemFlowNetwork.o infomap/infomap/InfomapBase.o infomap/io/HierarchicalNetwork.o infomap/io/TreeDataWriter.o infomap/io/BipartiteClusterReader.o infomap/io/version.o infomap/io/ClusterReader.o infomap/io/ProgramInterface.o infomap/utils/FileURI.o infomap/utils/Logger.o eclat/apriori/src/istree.o eclat/eclat/src/eclat.o eclat/math/src/chi2.o eclat/math/src/gamma.o eclat/math/src/ruleval.o eclat/tract/src/report.o eclat/tract/src/tract.o eclat/tract/src/patspec.o eclat/tract/src/fim16.o eclat/tract/src/clomax.o eclat/util/src/scanner.o eclat/util/src/arrays.o eclat/util/src/escape.o eclat/util/src/memsys.o eclat/util/src/tabread.o eclat/util/src/tabwrite.o eclat/util/src/symtab.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/multinet/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/multinet/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/multinet/src'
installing to /data/gannet/ripley/R/packages/tests-clang/multinet.Rcheck/00LOCK-multinet/00new/multinet/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (multinet)