- using R Under development (unstable) (2025-02-15 r87725)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 19.1.7
flang-new version 19.1.7
- running under: Fedora Linux 40 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘merDeriv/DESCRIPTION’ ... OK
- this is package ‘merDeriv’ version ‘0.2-4’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘merDeriv’ can be installed ... [17s/47s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [4s/17s] OK
- checking whether the package can be loaded with stated dependencies ... [4s/18s] OK
- checking whether the package can be unloaded cleanly ... [5s/20s] OK
- checking whether the namespace can be loaded with stated dependencies ... [4s/14s] OK
- checking whether the namespace can be unloaded cleanly ... [4s/16s] OK
- checking loading without being on the library search path ... [4s/17s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [27s/73s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [5s/14s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [164s/500s] ERROR
Running ‘tinytest.R’ [164s/499s]
Running the tests in ‘tests/tinytest.R’ failed.
Complete output:
>
> if ( requireNamespace("tinytest", quietly=TRUE) ){
+ tinytest::test_package("merDeriv")
+ }
Loading required package: lme4
Loading required package: Matrix
Loading required package: nonnest2
This is nonnest2 0.5-8.
nonnest2 has not been tested with all combinations of supported model classes.
Loading required package: sandwich
Loading required package: lavaan
This is lavaan 0.6-19
lavaan is FREE software! Please report any bugs.
test_merDeriv.R............... 0 tests
test_merDeriv.R............... 0 tests Loading required package: stats4
Loading required package: lattice
Attaching package: 'mirt'
The following object is masked from 'package:lme4':
fixef
test_merDeriv.R............... 0 tests
Attaching package: 'nlme'
The following object is masked from 'package:mirt':
fixef
The following object is masked from 'package:lme4':
lmList
test_merDeriv.R............... 0 tests
test_merDeriv.R............... 0 tests
test_merDeriv.R............... 0 tests
test_merDeriv.R............... 1 tests [0;31m1 fails [0m
test_merDeriv.R............... 1 tests [0;31m1 fails [0m
test_merDeriv.R............... 2 tests [0;31m1 fails [0m
test_merDeriv.R............... 2 tests [0;31m1 fails [0m
test_merDeriv.R............... 2 tests [0;31m1 fails [0m
test_merDeriv.R............... 2 tests [0;31m1 fails [0m
test_merDeriv.R............... 3 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 4 tests [0;31m2 fails [0m
test_merDeriv.R............... 5 tests [0;31m3 fails [0m
test_merDeriv.R............... 6 tests [0;31m3 fails [0m
test_merDeriv.R............... 7 tests [0;31m3 fails [0m
test_merDeriv.R............... 8 tests [0;31m3 fails [0m
test_merDeriv.R............... 8 tests [0;31m3 fails [0m
test_merDeriv.R............... 9 tests [0;31m3 fails [0m
test_merDeriv.R............... 9 tests [0;31m3 fails [0m
test_merDeriv.R............... 9 tests [0;31m3 fails [0m
test_merDeriv.R............... 10 tests [0;31m3 fails [0m
test_merDeriv.R............... 11 tests [0;31m3 fails [0m
test_merDeriv.R............... 11 tests [0;31m3 fails [0m
test_merDeriv.R............... 12 tests [0;31m3 fails [0m
test_merDeriv.R............... 12 tests [0;31m3 fails [0m
test_merDeriv.R............... 12 tests [0;31m3 fails [0m
test_merDeriv.R............... 13 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 14 tests [0;31m3 fails [0m
test_merDeriv.R............... 15 tests [0;31m3 fails [0m
test_merDeriv.R............... 15 tests [0;31m3 fails [0m
test_merDeriv.R............... 15 tests [0;31m3 fails [0m
test_merDeriv.R............... 16 tests [0;31m3 fails [0m
test_merDeriv.R............... 17 tests [0;31m3 fails [0m
test_merDeriv.R............... 17 tests [0;31m3 fails [0m
test_merDeriv.R............... 17 tests [0;31m3 fails [0m
test_merDeriv.R............... 17 tests [0;31m3 fails [0m
test_merDeriv.R............... 17 tests [0;31m3 fails [0m
test_merDeriv.R............... 17 tests [0;31m3 fails [0m
test_merDeriv.R............... 18 tests [0;31m3 fails [0m
test_merDeriv.R............... 19 tests [0;31m3 fails [0m
test_merDeriv.R............... 19 tests [0;31m3 fails [0m
test_merDeriv.R............... 19 tests [0;31m3 fails [0m
test_merDeriv.R............... 19 tests [0;31m3 fails [0m
test_merDeriv.R............... 19 tests [0;31m3 fails [0m
test_merDeriv.R............... 20 tests [0;31m4 fails [0m
test_merDeriv.R............... 20 tests [0;31m4 fails [0m
test_merDeriv.R............... 20 tests [0;31m4 fails [0m
test_merDeriv.R............... 20 tests [0;31m4 fails [0m
test_merDeriv.R............... 21 tests [0;31m4 fails [0m
test_merDeriv.R............... 22 tests [0;31m4 fails [0m
test_merDeriv.R............... 23 tests [0;31m4 fails [0m [0;34m8.1s [0m
----- FAILED[data]: test_merDeriv.R<11--12>
call| expect_equal(as.numeric(round(sum(llcont(lme4fit, level = 1)),
call| --> 4)), as.numeric(round(logLik(lme4fit), 4)))
diff| Expected '-Inf', got 'NaN'
----- FAILED[data]: test_merDeriv.R<25--26>
call| expect_equal(as.numeric(round(sum(llcont(subfit, level = 1)),
call| --> 4)), as.numeric(round(logLik(subfit), 4)))
diff| Expected '-Inf', got 'NaN'
----- FAILED[data]: test_merDeriv.R<65--65>
call| expect_true(all(score2_lavaan - score2 < 0.001))
diff| Expected TRUE, got FALSE
----- FAILED[data]: test_merDeriv.R<153--153>
call| expect_true(all(abs(nlmeres - lme4res) < 1))
diff| Expected TRUE, got FALSE
Error: 4 out of 23 tests failed
In addition: There were 17 warnings (use warnings() to see them)
Execution halted
- checking PDF version of manual ... [7s/20s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR