* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/latrend.Rcheck’
* using R Under development (unstable) (2025-02-28 r87848)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 20.1.0-rc3
    flang version 20.1.0-rc3
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘latrend/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘latrend’ version ‘1.6.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘latrend’ can be installed ... [33s/42s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/latrend-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [38s/50s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [217s/242s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [178s/213s] ERROR
  Running ‘testthat.R’ [177s/213s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(latrend)
  > 
  > test_check('latrend')
  Test "converged" did not generate the expected result:
    1 element mismatch
  Test "converged" did not generate the expected result:
    1 element mismatch
  Test "converged" did not generate the expected result:
    1 element mismatch
  Test "converged" did not generate the expected result:
    1 element mismatch
  Test "oneTraj.converged" did not generate the expected result:
    1 element mismatch
  Test "eachTraj.converged" did not generate the expected result:
    1 element mismatch
  [ FAIL 1 | WARN 18 | SKIP 12 | PASS 2350 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (9): 'test-crimcv.R:4:1', 'test-flexmix.R:2:1', 'test-funfem.R:3:1',
    'test-lcmm.R:2:1', 'test-mixak.R:2:1', 'test-mixtools.R:3:1',
    'test-parallel.R:1:1', 'test-stratify.R:79:3', 'test-stratify.R:89:3'
  • empty test (1): 'test-quick.R:1:1'
  • skipping MixTVEM tests because the TVEMMixNormal() function is not loaded
    (1): 'test-mixtvem.R:2:1'
  • {akmedoids} is not installed (1): 'test-akmedoids.R:2:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-twostep.R:28:5'): gckm ─────────────────────────────────────────
  Error in `test.latrend("lcMethodGCKM", instantiator = make.gckm, tests = tests)`: 
  Found 6 error(s) among 5 test context(s)
  Failed tests:
    basic: converged
    fitted: converged
    cluster-single: converged
    cluster-three: converged
    data-na: oneTraj.converged
    data-na: eachTraj.converged
  For details, see the respective test files in:
    "/data/gannet/ripley/R/packages/tests-clang/latrend.Rcheck/latrend/test-cases"
  Backtrace:
      â–†
   1. ├─testthat::expect_true(...) at test-twostep.R:27:3
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─latrend::test.latrend(...) at test-twostep.R:28:5
  
  [ FAIL 1 | WARN 18 | SKIP 12 | PASS 2350 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [133s/143s] OK
* checking PDF version of manual ... [25s/31s] OK
* checking HTML version of manual ... [18s/27s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR