* installing *source* package ‘hutilscpp’ ...
** package ‘hutilscpp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.6’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/hutilscpp/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c AnyCharMatch.c -o AnyCharMatch.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c CImplies.c -o CImplies.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c CSquish.c -o CSquish.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_FLIP.c -o C_FLIP.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_Mode.c -o C_Mode.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_abs_diff.c -o C_abs_diff.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_character2integer.c -o C_character2integer.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_empty.c -o C_empty.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_lehmer.c -o C_lehmer.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c C_op2M.c -o C_op2M.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cand3s.c -o Cand3s.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Ccoalesce0.c -o Ccoalesce0.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Ccount_logical.c -o Ccount_logical.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Ccumsum_reset.c -o Ccumsum_reset.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cdivisible.c -o Cdivisible.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cevery_int32.c -o Cevery_int32.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cis_constant.c -o Cis_constant.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cis_sorted.c -o Cis_sorted.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Clgl2raw.c -o Clgl2raw.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cor3s.c -o Cor3s.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cpar_in.c -o Cpar_in.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cpminmax.c -o Cpminmax.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Crange.c -o Crange.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Craw2lgl.c -o Craw2lgl.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Csum_isna.c -o Csum_isna.o
fatal error: error in backend: Cannot select: 0x828d520: i8,ch = AtomicLoad<(load monotonic (s8) from %ir.167), zext from i1> 0x80ed948, 0x828d210
0x828d210: i64,ch = CopyFromReg 0x80ed948, Register:i64 %17
0x828d050: i64 = Register %17
In function: Cminmax.omp_outlined.3
PLEASE submit a bug report to https://github.com/llvm/llvm-project/issues/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: /usr/local/clang19/bin/clang -I/data/gannet/ripley/R/R-clang/include -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Crange.c -o Crange.o
1. <eof> parser at end of file
2. Code generation
3. Running pass 'Function Pass Manager' on module 'Crange.c'.
4. Running pass 'X86 DAG->DAG Instruction Selection' on function '@Cminmax.omp_outlined.3'
#0 0x00000000019964d7 llvm::sys::PrintStackTrace(llvm::raw_ostream&, int) (/usr/local/clang19/bin/clang+0x19964d7)
#1 0x000000000199428e llvm::sys::RunSignalHandlers() (/usr/local/clang19/bin/clang+0x199428e)
#2 0x00000000019186ef (anonymous namespace)::CrashRecoveryContextImpl::HandleCrash(int, unsigned long) CrashRecoveryContext.cpp:0:0
#3 0x00000000019186ab (/usr/local/clang19/bin/clang+0x19186ab)
#4 0x0000000001990d17 llvm::sys::Process::Exit(int, bool) (/usr/local/clang19/bin/clang+0x1990d17)
#5 0x0000000000aebbe2 (/usr/local/clang19/bin/clang+0xaebbe2)
#6 0x000000000191d200 llvm::report_fatal_error(llvm::Twine const&, bool) (/usr/local/clang19/bin/clang+0x191d200)
#7 0x0000000002795211 (/usr/local/clang19/bin/clang+0x2795211)
#8 0x0000000002794745 (/usr/local/clang19/bin/clang+0x2794745)
#9 0x0000000000bcc21e (anonymous namespace)::X86DAGToDAGISel::Select(llvm::SDNode*) X86ISelDAGToDAG.cpp:0:0
#10 0x000000000278b9cc llvm::SelectionDAGISel::DoInstructionSelection() (/usr/local/clang19/bin/clang+0x278b9cc)
#11 0x000000000278b0b7 llvm::SelectionDAGISel::CodeGenAndEmitDAG() (/usr/local/clang19/bin/clang+0x278b0b7)
#12 0x000000000278a3de llvm::SelectionDAGISel::SelectAllBasicBlocks(llvm::Function const&) (/usr/local/clang19/bin/clang+0x278a3de)
#13 0x00000000027881b4 llvm::SelectionDAGISel::runOnMachineFunction(llvm::MachineFunction&) (/usr/local/clang19/bin/clang+0x27881b4)
#14 0x0000000002786cfe llvm::SelectionDAGISelLegacy::runOnMachineFunction(llvm::MachineFunction&) (/usr/local/clang19/bin/clang+0x2786cfe)
#15 0x00000000010e3d70 llvm::MachineFunctionPass::runOnFunction(llvm::Function&) (/usr/local/clang19/bin/clang+0x10e3d70)
#16 0x000000000158d51c llvm::FPPassManager::runOnFunction(llvm::Function&) (/usr/local/clang19/bin/clang+0x158d51c)
#17 0x00000000015947d3 llvm::FPPassManager::runOnModule(llvm::Module&) (/usr/local/clang19/bin/clang+0x15947d3)
#18 0x000000000158e17d llvm::legacy::PassManagerImpl::run(llvm::Module&) (/usr/local/clang19/bin/clang+0x158e17d)
#19 0x0000000001b592a1 clang::EmitBackendOutput(clang::DiagnosticsEngine&, clang::HeaderSearchOptions const&, clang::CodeGenOptions const&, clang::TargetOptions const&, clang::LangOptions const&, llvm::StringRef, llvm::Module*, clang::BackendAction, llvm::IntrusiveRefCntPtr<llvm::vfs::FileSystem>, std::unique_ptr<llvm::raw_pwrite_stream, std::default_delete<llvm::raw_pwrite_stream>>, clang::BackendConsumer*) (/usr/local/clang19/bin/clang+0x1b592a1)
#20 0x000000000202092b clang::BackendConsumer::HandleTranslationUnit(clang::ASTContext&) (/usr/local/clang19/bin/clang+0x202092b)
#21 0x0000000003880537 clang::ParseAST(clang::Sema&, bool, bool) (/usr/local/clang19/bin/clang+0x3880537)
#22 0x00000000022b43f7 clang::FrontendAction::Execute() (/usr/local/clang19/bin/clang+0x22b43f7)
#23 0x0000000002220b96 clang::CompilerInstance::ExecuteAction(clang::FrontendAction&) (/usr/local/clang19/bin/clang+0x2220b96)
#24 0x000000000237d52e clang::ExecuteCompilerInvocation(clang::CompilerInstance*) (/usr/local/clang19/bin/clang+0x237d52e)
#25 0x0000000000aeba12 cc1_main(llvm::ArrayRef<char const*>, char const*, void*) (/usr/local/clang19/bin/clang+0xaeba12)
#26 0x0000000000ae8c65 ExecuteCC1Tool(llvm::SmallVectorImpl<char const*>&, llvm::ToolContext const&) driver.cpp:0:0
#27 0x000000000206b979 void llvm::function_ref<void ()>::callback_fn<clang::driver::CC1Command::Execute(llvm::ArrayRef<std::optional<llvm::StringRef>>, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>*, bool*) const::$_1>(long) Job.cpp:0:0
#28 0x0000000001918695 llvm::CrashRecoveryContext::RunSafely(llvm::function_ref<void ()>) (/usr/local/clang19/bin/clang+0x1918695)
#29 0x000000000206b405 clang::driver::CC1Command::Execute(llvm::ArrayRef<std::optional<llvm::StringRef>>, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>*, bool*) const (/usr/local/clang19/bin/clang+0x206b405)
#30 0x000000000202d1d3 clang::driver::Compilation::ExecuteCommand(clang::driver::Command const&, clang::driver::Command const*&, bool) const (/usr/local/clang19/bin/clang+0x202d1d3)
#31 0x000000000202d40e clang::driver::Compilation::ExecuteJobs(clang::driver::JobList const&, llvm::SmallVectorImpl<std::pair<int, clang::driver::Command const*>>&, bool) const (/usr/local/clang19/bin/clang+0x202d40e)
#32 0x000000000204bf90 clang::driver::Driver::ExecuteCompilation(clang::driver::Compilation&, llvm::SmallVectorImpl<std::pair<int, clang::driver::Command const*>>&) (/usr/local/clang19/bin/clang+0x204bf90)
#33 0x0000000000ae845c clang_main(int, char**, llvm::ToolContext const&) (/usr/local/clang19/bin/clang+0xae845c)
#34 0x0000000000af6af7 main (/usr/local/clang19/bin/clang+0xaf6af7)
#35 0x00007f849c629510 __libc_start_call_main (/lib64/libc.so.6+0x29510)
#36 0x00007f849c6295c9 __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x295c9)
#37 0x0000000000ae65e5 _start (/usr/local/clang19/bin/clang+0xae65e5)
clang: error: clang frontend command failed with exit code 70 (use -v to see invocation)
clang version 19.1.6
Target: x86_64-unknown-linux-gnu
Thread model: posix
InstalledDir: /usr/local/clang19/bin
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Csum_raw.c -o Csum_raw.o
clang: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
clang: note: diagnostic msg: /tmp/RtmpsodA7Y/working_dir/Crange-943532.c
clang: note: diagnostic msg: /tmp/RtmpsodA7Y/working_dir/Crange-943532.sh
clang: note: diagnostic msg:
********************
make[1]: *** [/data/gannet/ripley/R/R-clang/etc/Makeconf:195: Crange.o] Error 1
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c CtexParse.c -o CtexParse.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cwhich_16.c -o Cwhich_16.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cwhich_even.c -o Cwhich_even.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cwhich_first.c -o Cwhich_first.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cwhich_isna.c -o Cwhich_isna.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cwhich_last.c -o Cwhich_last.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Cwhich_true_onwards.c -o Cwhich_true_onwards.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ScalarLength.c -o ScalarLength.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c allocate.c -o allocate.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c altrep.c -o altrep.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c anyOutside.c -o anyOutside.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c asInteger2.c -o asInteger2.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c between.c -o between.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c character.c -o character.o
character.c:126:7: warning: variable 'opt_group' set but not used [-Wunused-but-set-variable]
126 | int opt_group = 0;
| ^
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c dbl2int.c -o dbl2int.o
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c error-warnings.c -o error-warnings.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c extent.c -o extent.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c fastmatch_fastmatch.c -o fastmatch_fastmatch.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c fmatchp_lgl.c -o fmatchp_lgl.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c haversineDistance.c -o haversineDistance.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c is_seq.c -o is_seq.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c is_true.c -o is_true.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c isntRaw.c -o isntRaw.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c logical3.c -o logical3.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c minmax.c -o minmax.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c omp_diagnose.c -o omp_diagnose.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c op_xlen2.c -o op_xlen2.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c pcg_hash.c -o pcg_hash.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c single_ox_x1_x2.c -o single_ox_x1_x2.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c summary3.c -o summary3.o
make[1]: Target 'all' not remade because of errors.
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/hutilscpp/src'
ERROR: compilation failed for package ‘hutilscpp’
* removing ‘/data/gannet/ripley/R/packages/tests-clang/hutilscpp.Rcheck/hutilscpp’