* installing *source* package ‘glmpath’ ... ** package ‘glmpath’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 19.1.5’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/glmpath/src' /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c asa_cg.c -o asa_cg.o asa_cg.c:377:20: warning: unused variable 'mess1' [-Wunused-variable] 377 | const char mess1 [] = "Possible causes of this error message:" ; | ^~~~~ asa_cg.c:378:20: warning: unused variable 'mess2' [-Wunused-variable] 378 | const char mess2 [] = " - your tolerance may be too strict: " | ^~~~~ asa_cg.c:380:20: warning: unused variable 'mess4' [-Wunused-variable] 380 | const char mess4 [] = " - your gradient routine has an error" ; | ^~~~~ asa_cg.c:381:20: warning: unused variable 'mess5' [-Wunused-variable] 381 | const char mess5 [] = " - the parameter epsilon in " | ^~~~~ 4 warnings generated. /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c glmpath_init.c -o glmpath_init.o /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c solve_coxpath.c -o solve_coxpath.o solve_coxpath.c:160:7: warning: unused variable 'iy' [-Wunused-variable] 160 | int iy, id, irept, ipenalty, i, j, k0, k, l; | ^~ solve_coxpath.c:303:7: warning: unused variable 'iy' [-Wunused-variable] 303 | int iy, id, irept, ipenalty, ieta, iwsum, ilp, i, j, k0, k, l; | ^~ 2 warnings generated. /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c solve_glmpath.c -o solve_glmpath.o /usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o glmpath.so asa_cg.o glmpath_init.o solve_coxpath.o solve_glmpath.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/glmpath/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/glmpath/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/glmpath/src' installing to /data/gannet/ripley/R/packages/tests-clang/glmpath.Rcheck/00LOCK-glmpath/00new/glmpath/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmpath)