• using R Under development (unstable) (2025-02-19 r87749)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 20.1.0-rc2     flang version 20.1.0-rc2
• running under: Fedora Linux 40 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘glmertree/DESCRIPTION’ ... OK
• this is package ‘glmertree’ version ‘0.2-6’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘glmertree’ can be installed ... [18s/31s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [31s/56s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... ERROR   Running ‘test_glmertree.R’ Running the tests in ‘tests/test_glmertree.R’ failed. Complete output:   > library("glmertree")   Loading required package: lme4   Loading required package: Matrix   Loading required package: partykit   Loading required package: grid   Loading required package: libcoin   Loading required package: mvtnorm   > options(width = 70, prompt = "R> ", continue = "+ ", digits = 4)   R>   R> data("DepressionDemo", package = "glmertree")   R> summary(DepressionDemo)      depression treatment cluster age    Min. : 3.00 Treatment 1:78 1 :15 Min. :18    1st Qu.: 7.00 Treatment 2:72 2 :15 1st Qu.:39    Median : 9.00 3 :15 Median :45    Mean : 9.12 4 :15 Mean :45    3rd Qu.:11.00 5 :15 3rd Qu.:52    Max. :16.00 6 :15 Max. :69                                     (Other):60       anxiety duration depression_bin    Min. : 3.0 Min. : 1.00 0:78    1st Qu.: 8.0 1st Qu.: 5.00 1:72    Median :10.0 Median : 7.00    Mean :10.3 Mean : 6.97    3rd Qu.:12.0 3rd Qu.: 9.00    Max. :18.0 Max. :17.00                                                    R>   R> lmm_tree <- lmertree(depression ~ treatment | cluster | age + duration + anxiety,   + data = DepressionDemo)   Error in if (continue & (abs(newloglik - oldloglik[2]) < abstol)) { :     missing value where TRUE/FALSE needed   Calls: lmertree   In addition: Warning messages:   1: In optwrap(optimizer, devfun, getStart(start, rho$pp), lower = rho$lower, :     convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera).   2: In checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, :     Model failed to converge with max|grad| = 2.14658 (tol = 0.002, component 1)   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... ERROR Error(s) in re-building vignettes: --- re-building ‘glmertree.Rnw’ using Sweave Loading required package: lme4 Loading required package: Matrix Loading required package: partykit Loading required package: grid Loading required package: libcoin Loading required package: mvtnorm Warning in optwrap(optimizer, devfun, getStart(start, rho$pp), lower = rho$lower, :   convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). Warning in checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, :   Model failed to converge with max|grad| = 0.754457 (tol = 0.002, component 1) Error: processing vignette 'glmertree.Rnw' failed with diagnostics:  chunk 6 Error in if (continue & (abs(newloglik - oldloglik[2]) < abstol)) { :   missing value where TRUE/FALSE needed --- failed re-building ‘glmertree.Rnw’ SUMMARY: processing the following file failed:   ‘glmertree.Rnw’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs