• using R Under development (unstable) (2024-11-09 r87314)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 19.1.3     flang-new version 19.1.3
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘gadget3/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘gadget3’ version ‘0.12-1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘gadget3’ can be installed ... [14s/17s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [34s/42s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... INFO Undeclared package ‘mfdb’ in Rd xrefs
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [21s/23s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [127s/155s] OK   Running ‘test-aab_env.R’   Running ‘test-action_age.R’   Running ‘test-action_grow.R’   Running ‘test-action_mature.R’   Running ‘test-action_migrate.R’   Running ‘test-action_naturalmortality.R’   Running ‘test-action_predate-catchability.R’   Running ‘test-action_predate-numberfleet.R’   Running ‘test-action_predate.R’   Running ‘test-action_renewal.R’   Running ‘test-action_report.R’   Running ‘test-action_spawn-multipleoutputs.R’   Running ‘test-action_spawn.R’   Running ‘test-action_tagging.R’   Running ‘test-action_time.R’   Running ‘test-eval.R’   Running ‘test-formula_utils.R’   Running ‘test-init_val.R’   Running ‘test-likelihood_bounds.R’   Running ‘test-likelihood_data.R’   Running ‘test-likelihood_distribution-surveyindices.R’   Running ‘test-likelihood_distribution.R’ [19s/21s]   Running ‘test-likelihood_random.R’   Running ‘test-likelihood_tagging_ckmr.R’   Running ‘test-likelihood_understocking.R’   Running ‘test-params.R’   Running ‘test-run.R’   Running ‘test-run_r.R’   Running ‘test-run_tmb-reporting_enabled.R’   Running ‘test-run_tmb.R’   Running ‘test-step.R’   Running ‘test-stock.R’   Running ‘test-stock_age.R’   Running ‘test-stock_areas.R’   Running ‘test-stock_tag.R’   Running ‘test-stock_time.R’   Running ‘test-suitability.R’   Running ‘test-timedata.R’   Running ‘test-timevariable.R’
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [81s/116s] OK
• checking PDF version of manual ... [12s/16s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: OK