* installing *source* package ‘fromo’ ...
** package ‘fromo’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.7’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/fromo/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c common.cpp -o common.o
common.cpp:82:21: warning: unused variable 'ppp' [-Wunused-variable]
82 | int iii,jjj,mmm,ppp;
| ^~~
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c fromo.cpp -o fromo.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c running.cpp -o running.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c runningmean.cpp -o runningmean.o
In file included from fromo.cpp:42:
./welford.h:407:20: warning: unused variable 'diffw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:26: warning: unused variable 'diffx' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:32: warning: unused variable 'diffxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~~
./welford.h:407:39: warning: unused variable 'addxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:45: warning: unused variable 'remxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:51: warning: unused variable 'nelm' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~
./welford.h:447:21: warning: unused variable 'qqq' [-Wunused-variable]
447 | int ppp,qqq;
| ^~~
./welford.h:531:21: warning: unused variable 'qqq' [-Wunused-variable]
531 | int ppp,qqq;
| ^~~
./welford.h:738:12: warning: unused variable 'nextv' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
./welford.h:738:19: warning: unused variable 'nextw' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
In file included from fromo.cpp:43:
./running.h:105:28: warning: unused variable 'denom' [-Wunused-variable]
105 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~
./running.h:105:48: warning: unused variable 'sigmapow' [-Wunused-variable]
105 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~~~~
In file included from running.cpp:31:
./welford.h:407:20: warning: unused variable 'diffw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:26: warning: unused variable 'diffx' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:32: warning: unused variable 'diffxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~~
./welford.h:407:39: warning: unused variable 'addxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:45: warning: unused variable 'remxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:51: warning: unused variable 'nelm' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~
./welford.h:447:21: warning: unused variable 'qqq' [-Wunused-variable]
447 | int ppp,qqq;
| ^~~
./welford.h:531:21: warning: unused variable 'qqq' [-Wunused-variable]
531 | int ppp,qqq;
| ^~~
./welford.h:738:12: warning: unused variable 'nextv' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
./welford.h:738:19: warning: unused variable 'nextw' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
In file included from running.cpp:32:
./running.h:105:28: warning: unused variable 'denom' [-Wunused-variable]
105 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~
./running.h:105:48: warning: unused variable 'sigmapow' [-Wunused-variable]
105 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~~~~
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c t_running.cpp -o t_running.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c t_runningmean.cpp -o t_runningmean.o
12 warnings generated.
In file included from runningmean.cpp:26:
In file included from ./runningmean.h:31:
./welford.h:407:20: warning: unused variable 'diffw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:26: warning: unused variable 'diffx' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:32: warning: unused variable 'diffxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~~
./welford.h:407:39: warning: unused variable 'addxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:45: warning: unused variable 'remxw' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~~
./welford.h:407:51: warning: unused variable 'nelm' [-Wunused-variable]
407 | double diffw,diffx,diffxw,addxw,remxw,nelm;
| ^~~~
./welford.h:447:21: warning: unused variable 'qqq' [-Wunused-variable]
447 | int ppp,qqq;
| ^~~
./welford.h:531:21: warning: unused variable 'qqq' [-Wunused-variable]
531 | int ppp,qqq;
| ^~~
./welford.h:738:12: warning: unused variable 'nextv' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
./welford.h:738:19: warning: unused variable 'nextw' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
In file included from t_runningmean.cppIn file included from :26t_running.cpp:
:In file included from 31./t_runningmean.h:
:./welford.h31::
407./welford.h::20407:: 20warning: :unused variable 'diffw' [-Wunused-variable]
warning: unused variable 'diffw' [-Wunused-variable]
407 | doubl e407 | d i f f w , d i f f x , ddiofufbxlwe, addidfxfww,,rdeimfxfwx,,ndeilfmf;x
w ,| a ^~~~~d
dxw,rem./welford.hx:w407,:n26e:l mwarning: ;unused variable 'diffx' [-Wunused-variable]
| ^~~~~
407 | ./welford.h : 407 : 26 : warning: unused variable 'diffx' [-Wunused-variable]
doub l407e | d i f f w , d i f f x, ddiofufbxlwe, addidfxfww,,rdeimfxfwx,,ndeilfmf;x
w ,| a ^~~~~d
dxw,./welford.hr:e407m:x32w:, nwarning: eunused variable 'diffxw' [-Wunused-variable]l
m;
| 407 ^~~~~ |
./welford.h : 407 : 32 : warning: unused variable 'diffxw' [-Wunused-variable]d
oubl e407 | d i f f w , d i f f x , ddiofufbxlwe, addidfxfww,,rdeimfxfwx,,ndeilfmf;x
w ,| a ^~~~~~d
dxw./welford.h,:r407e:m39x:w ,warning: nunused variable 'addxw' [-Wunused-variable]e
lm;
407| | ^~~~~~
./welford.h : 407 : 39 : warning: dunused variable 'addxw' [-Wunused-variable]o
uble 407d | i f f w , d i f f x , d idfofuxbwl,ea dddixfwf,wr,edmixfwf,xn,edlimf;f
x w| , ^~~~~a
ddxw./welford.h,:r407e:m45x:w ,warning: nunused variable 'remxw' [-Wunused-variable]e
lm;
407| | ^~~~~
./welford.h : 407 : 45 : warning: dunused variable 'remxw' [-Wunused-variable]o
uble 407d | i f f w , d i f f x , d idfofuxbwl,ea dddixfwf,wr,edmixfwf,xn,edlimf;f
x w| , ^~~~~a
ddxw./welford.h,:r407e:m51x:w ,warning: nunused variable 'nelm' [-Wunused-variable]e
lm;
407| | ^~~~~
./welford.h : 407 : 51 : warning: dunused variable 'nelm' [-Wunused-variable]o
uble 407d | i f f w , d i f f x , d idfofuxbwl,ea dddixfwf,wr,edmixfwf,xn,edlimf;f
x w| , ^~~~a
ddxw,remxw,nelm;
| ^~~~
./welford.h:447:21: warning: unused variable 'qqq' [-Wunused-variable]
447 | int ppp,qqq;
./welford.h :| 447 ^~~:
21: warning: unused variable 'qqq' [-Wunused-variable]
447 | int ppp,qqq;
| ^~~
./welford.h:531:21: warning: unused variable 'qqq' [-Wunused-variable]
./welford.h: 531531: | 21 : warning: unused variable 'qqq' [-Wunused-variable]
531 | i n t p p p , q q qi;n
t | p ^~~p
p,qqq;
| ^~~
./welford.h:738:12: warning: unused variable 'nextv' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
./welford.h:738:19: warning: unused variable 'nextw' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
./welford.h:738:12: warning: unused variable 'nextv' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
./welford.h:738:19: warning: unused variable 'nextw' [-Wunused-variable]
738 | double nextv, nextw, renorm, nok;
| ^~~~~
In file included from t_runningmean.cpp:26:
./t_runningmean.h:130:13: warning: unused variable 'jjj' [-Wunused-variable]
130 | int iii,jjj,lll,tr_iii,tr_jjj;
| ^~~
In file included from t_running.cpp:32:
./running.h:105:28: warning: unused variable 'denom' [-Wunused-variable]
105 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~
./running.h:105:48: warning: unused variable 'sigmapow' [-Wunused-variable]
105 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~~~~
In file included from t_running.cpp:33:
./t_running.h:166:9: warning: unused variable 'iii' [-Wunused-variable]
166 | int iii,jjj,lll,tr_iii,tr_jjj;
| ^~~
./t_running.h:166:13: warning: unused variable 'jjj' [-Wunused-variable]
166 | int iii,jjj,lll,tr_iii,tr_jjj;
| ^~~
./t_running.h:184:28: warning: unused variable 'denom' [-Wunused-variable]
184 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~
./t_running.h:184:48: warning: unused variable 'sigmapow' [-Wunused-variable]
184 | double sg_denom,renorm,denom,sigmasq,sigma,sigmapow,mydf,dwsum,skew,exkurt,sr;
| ^~~~~~~~
10 warnings generated.
11 warnings generated.
16 warnings generated.
12 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o fromo.so RcppExports.o common.o fromo.o running.o runningmean.o t_running.o t_runningmean.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/fromo/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/fromo/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/fromo/src'
installing to /data/gannet/ripley/R/packages/tests-clang/fromo.Rcheck/00LOCK-fromo/00new/fromo/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fromo)