Install log for 'fio'

* installing *source* package ‘fio’ ...
** package ‘fio’ successfully unpacked and MD5 sums checked
** using staged installation
Using cargo 1.69.0
Using rustc 1.69.0 (84c898d65 2023-04-16) (Fedora 1.69.0-1.fc36)
** libs
using C compiler: ‘clang version 18.1.8’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
rm -Rf fio.so ./rust/target/release/libfio.a entrypoint.o /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo /data/gannet/ripley/R/packages/tests-clang/fio/src/vendor
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c entrypoint.c -o entrypoint.o
if [ -f ./rust/vendor.tar.xz ]; then \
	tar xf rust/vendor.tar.xz && \
	mkdir -p /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo && \
	cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo/config.toml; \
fi
# In some environments, ~/.cargo/bin might not be included in PATH, so we need
# to set it here to ensure cargo can be invoked. It is appended to PATH and
# therefore is only used if cargo is absent from the user's PATH.
if [ "" != "true" ]; then \
	export CARGO_HOME=/data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo; \
fi && \
	export PATH="/usr/local/clang/bin:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:.:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \
		cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target && \
		echo "Rust version:" `rustc --version` && \
		echo "Cargo version:" `cargo --version`;
   Compiling proc-macro2 v1.0.86
   Compiling libm v0.2.8
   Compiling autocfg v1.3.0
   Compiling unicode-ident v1.0.12
   Compiling num-traits v0.2.19
   Compiling quote v1.0.36
   Compiling syn v2.0.71
   Compiling rand_core v0.6.4
   Compiling rand v0.8.5
   Compiling bytemuck v1.16.1
   Compiling num-complex v0.4.6
   Compiling nano-gemm-codegen v0.1.0
   Compiling crossbeam-utils v0.8.20
   Compiling thiserror v1.0.62
   Compiling crossbeam-epoch v0.9.18
   Compiling paste v1.0.15
   Compiling rayon-core v1.12.1
   Compiling reborrow v0.5.5
   Compiling crossbeam-deque v0.8.5
   Compiling thiserror-impl v1.0.62
   Compiling pulp v0.18.21
   Compiling bitflags v1.3.2
   Compiling either v1.13.0
   Compiling once_cell v1.19.0
   Compiling rayon v1.10.0
   Compiling raw-cpuid v10.7.0
   Compiling dyn-stack v0.10.0
   Compiling ucd-trie v0.1.6
   Compiling seq-macro v0.3.5
   Compiling memchr v2.7.4
   Compiling gemm-common v0.18.0
   Compiling pest v2.7.11
   Compiling nano-gemm-core v0.1.0
   Compiling pest_meta v2.7.11
   Compiling nano-gemm-c64 v0.1.0
   Compiling nano-gemm-c32 v0.1.0
   Compiling nano-gemm-f32 v0.1.0
   Compiling nano-gemm-f64 v0.1.0
   Compiling num-integer v0.1.46
   Compiling pest_generator v2.7.11
   Compiling libR-sys v0.7.0 (https://github.com/extendr/libR-sys?rev=976c56d396175f8d09548b0a1f0a77fc393018f2#976c56d3)
   Compiling pest_derive v2.7.11
   Compiling num-bigint v0.4.6
   Compiling equator-macro v0.2.1
   Compiling serde v1.0.204
   Compiling libc v0.2.155
   Compiling equator v0.2.2
   Compiling py_literal v0.4.0
   Compiling gemm-f64 v0.18.0
   Compiling gemm-c32 v0.18.0
   Compiling gemm-f32 v0.18.0
   Compiling gemm-c64 v0.18.0
   Compiling serde_derive v1.0.204
   Compiling coe-rs v0.1.2
   Compiling matrixcompare-core v0.1.0
   Compiling byteorder v1.5.0
   Compiling extendr-api v0.7.0
   Compiling npyz v0.8.3
   Compiling matrixcompare v0.3.0
   Compiling faer-entity v0.19.0
   Compiling gemm v0.18.0
   Compiling nano-gemm v0.1.2
   Compiling extendr-macros v0.7.0
   Compiling rand_distr v0.4.3
   Compiling dbgf v0.1.2
   Compiling faer v0.19.1
   Compiling num_cpus v1.16.0
   Compiling fio v0.1.1 (/data/gannet/ripley/R/packages/tests-clang/fio/src/rust)
    Finished release [optimized] target(s) in 17m 09s
Rust version: rustc 1.69.0 (84c898d65 2023-04-16) (Fedora 1.69.0-1.fc36)
Cargo version: cargo 1.69.0
rm -Rf /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo /data/gannet/ripley/R/packages/tests-clang/fio/src/vendor ./rust/target/release/build; \

/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o fio.so entrypoint.o -L./rust/target/release -lfio
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
installing to /data/gannet/ripley/R/packages/tests-clang/fio.Rcheck/00LOCK-fio/00new/fio/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fio)