* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/epigrowthfit.Rcheck’
* using R Under development (unstable) (2025-02-19 r87756)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 20.1.0-rc2
    flang version 20.1.0-rc2
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘epigrowthfit/DESCRIPTION’ ... OK
* this is package ‘epigrowthfit’ version ‘0.15.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘epigrowthfit’ can be installed ... [6m/19m] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/epigrowthfit-00install.html' for details.
* used C++ compiler: ‘clang version 20.1.0-rc2’
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [3s/11s] OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... [3s/10s] OK
* checking whether the namespace can be loaded with stated dependencies ... [3s/10s] OK
* checking whether the namespace can be unloaded cleanly ... [3s/11s] OK
* checking loading without being on the library search path ... [3s/10s] OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [43s/124s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [37s/82s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [407s/555s] OK
  Running ‘coef.R’ [7s/22s]
  Running ‘confint.R’ [52s/110s]
  Running ‘datetime.R’
  Running ‘egf.R’ [7s/13s]
  Running ‘egf_enum.R’
  Running ‘egf_eval.R’
  Running ‘egf_examples_day_of_week.R’
  Running ‘egf_examples_excess.R’
  Running ‘egf_examples_fixed.R’
  Running ‘egf_examples_random.R’ [87s/114s]
  Running ‘egf_link.R’
  Running ‘egf_misc.R’
  Running ‘egf_options.R’
  Running ‘egf_utils.R’ [9s/10s]
  Running ‘epidemic.R’
  Running ‘extract.R’
  Running ‘fitted.R’
  Running ‘gi.R’
  Running ‘include.R’ [141s/148s]
  Running ‘language.R’
  Running ‘prior.R’
  Running ‘profile.R’ [28s/43s]
  Running ‘summary.R’
  Running ‘utils.R’
  Running ‘validity.R’
  Running ‘zzz.R’
* checking PDF version of manual ... [10s/10s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: OK