• using R Under development (unstable) (2024-12-20 r87452)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 19.1.6     flang-new version 19.1.6
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘duckdbfs/DESCRIPTION’ ... OK
• this is package ‘duckdbfs’ version ‘0.0.9’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘duckdbfs’ can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/17s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [8s/35s] ERROR   Running ‘spelling.R’   Running ‘testthat.R’ [7s/33s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/tests.html   > # * https://testthat.r-lib.org/reference/test_package.html#special-files   >   > library(testthat)   > library(duckdbfs)   >   >   >   >   > test_check("duckdbfs")       *** caught segfault ***   address 0x1, cause 'memory not mapped'      Traceback:    1: rapi_execute(stmt, arrow, integer64)    2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})    3: doTryCatch(return(expr), name, parentenv, handler)    4: tryCatchOne(expr, names, parentenv, handlers[[1L]])    5: tryCatchList(expr, classes, parentenv, handlers)    6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])    7: rlang::try_fetch(rapi_execute(stmt, arrow, integer64), error = function(e) { rethrow_error_from_rapi(e, call)})    8: rethrow_rapi_execute(res@stmt_lst$ref, res@arrow, res@connection@bigint == "integer64")    9: duckdb_execute(res)   10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)   11: .local(conn, statement, ...)   12: dbSendQuery(conn, statement, ...)   13: dbSendQuery(conn, statement, ...)   14: dbSendStatement(conn, statement, ...)   15: dbSendStatement(conn, statement, ...)   16: DBI::dbExecute(conn, glue::glue("LOAD '{extension}';"))   17: DBI::dbExecute(conn, glue::glue("LOAD '{extension}';"))   18: load_extension("httpfs", conn = conn, nightly = nightly, force = force)   19: load_httpfs(nightly = FALSE, force = FALSE)   20: eval(code, test_env)   21: eval(code, test_env)   22: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error)   23: doTryCatch(return(expr), name, parentenv, handler)   24: tryCatchOne(expr, names, parentenv, handlers[[1L]])   25: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])   26: doTryCatch(return(expr), name, parentenv, handler)   27: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])   28: tryCatchList(expr, classes, parentenv, handlers)   29: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })   30: test_code(desc, code, env = parent.frame(), reporter = reporter)   31: test_that("extensions installation", { load_httpfs(nightly = FALSE, force = FALSE) exts <- duckdb_extensions() status <- exts[exts$extension_name == "httpfs", ] expect_true(status$installed) expect_equal(status$installed_from, "core") load_spatial(nightly = FALSE, force = TRUE) exts <- duckdb_extensions() status <- exts[exts$extension_name == "httpfs", ] expect_true(status$installed) expect_equal(status$installed_from, "core")})   32: eval(code, test_env)   33: eval(code, test_env)   34: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error)   35: doTryCatch(return(expr), name, parentenv, handler)   36: tryCatchOne(expr, names, parentenv, handlers[[1L]])   37: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])   38: doTryCatch(return(expr), name, parentenv, handler)   39: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])   40: tryCatchList(expr, classes, parentenv, handlers)   41: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })   42: test_code(test = NULL, code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())   43: source_file(path, env = env(env), desc = desc, error_call = error_call)   44: FUN(X[[i]], ...)   45: lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call)   46: doTryCatch(return(expr), name, parentenv, handler)   47: tryCatchOne(expr, names, parentenv, handlers[[1L]])   48: tryCatchList(expr, classes, parentenv, handlers)   49: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})   50: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call))   51: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, error_call = error_call)   52: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel)   53: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")   54: test_check("duckdbfs")   An irrecoverable exception occurred. R is aborting now ...
• checking PDF version of manual ... [7s/21s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR