• using R Under development (unstable) (2025-02-19 r87749)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 20.1.0-rc2     flang version 20.1.0-rc2
• running under: Fedora Linux 40 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘dominanceanalysis/DESCRIPTION’ ... OK
• this is package ‘dominanceanalysis’ version ‘2.1.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘dominanceanalysis’ can be installed ... [10s/15s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [16s/25s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [22s/40s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [49s/86s] ERROR   Running ‘testthat.R’ [48s/85s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(dominanceanalysis)   >   > test_check("dominanceanalysis")   [ FAIL 2 | WARN 162 | SKIP 0 | PASS 207 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-da-with-lmm.R:17:3'): contribution.average are correct ───────   ca$rb.r2.1 not equal to c(N = 0.34, P = -0.03, K = 0.15).   3/3 mismatches (average diff: 0.0293)   [1] 0.2844 - 0.34 == -0.05558   [2] -0.0233 - -0.03 == 0.00666   [3] 0.1243 - 0.15 == -0.02566   ── Failure ('test-lmmR2-lme4.R:60:2'): Report correct values for lmer comparing both models ──   lmmR2.1$sb.r2.2 not equal to 0.25.   1/1 mismatches   [1] 0.435 - 0.25 == 0.185      [ FAIL 2 | WARN 162 | SKIP 0 | PASS 207 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/17s] OK
• checking PDF version of manual ... [9s/11s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR