* installing *source* package ‘collpcm’ ...
** package ‘collpcm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/collpcm/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c GaussianMixtureModel.c -o GaussianMixtureModel.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c NetworkLib.c -o NetworkLib.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cat.c -o cat.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c collapsed_lpcm.c -o collapsed_lpcm.o
collapsed_lpcm.c:19:2: warning: suggest braces around initialization of subobject [-Wmissing-braces]
   19 |         NULL
      |         ^~~~
      |         {   }
/usr/local/clang19/lib/clang/19/include/__stddef_null.h:26:14: note: expanded from macro 'NULL'
   26 | #define NULL ((void*)0)
      |              ^~~~~~~~~~
collapsed_lpcm.c:32:9: warning: variable 'tinit' set but not used [-Wunused-but-set-variable]
   32 |         double tinit, lps;
      |                ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c nrutil.c -o nrutil.o
/usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o collpcm.so GaussianMixtureModel.o NetworkLib.o cat.o collapsed_lpcm.o nrutil.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/collpcm/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/collpcm/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/collpcm/src'
installing to /data/gannet/ripley/R/packages/tests-clang/collpcm.Rcheck/00LOCK-collpcm/00new/collpcm/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (collpcm)