- using R Under development (unstable) (2024-12-10 r87437)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 19.1.5
flang-new version 19.1.5
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘chem.databases/DESCRIPTION’ ... OK
- this is package ‘chem.databases’ version ‘1.0.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘chem.databases’ can be installed ... [19s/26s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... NOTE
checkRd: (-1) atsdr_tsca_ld50_a.Rd:10: Lost braces
10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:10: Lost braces
10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:11: Lost braces
11 | item{Substance Name}{Preferred Chemical Substance Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:11: Lost braces
11 | item{Substance Name}{Preferred Chemical Substance Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:12: Lost braces
12 | item{Registry Name}{Registry Chemical Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:12: Lost braces
12 | item{Registry Name}{Registry Chemical Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:13: Lost braces
13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
| ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:13: Lost braces
13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:10: Lost braces
10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:10: Lost braces
10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:11: Lost braces
11 | item{Substance Name}{Preferred Chemical Substance Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:11: Lost braces
11 | item{Substance Name}{Preferred Chemical Substance Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:12: Lost braces
12 | item{Registry Name}{Registry Chemical Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:12: Lost braces
12 | item{Registry Name}{Registry Chemical Name}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:13: Lost braces
13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
| ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:13: Lost braces
13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
| ^
checkRd: (-1) chem_wiki.Rd:10: Lost braces
10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
| ^
checkRd: (-1) chem_wiki.Rd:10: Lost braces
10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
| ^
checkRd: (-1) chem_wiki.Rd:11: Lost braces
11 | item{Substance Name}{Preferred Chemical Substance Name}
| ^
checkRd: (-1) chem_wiki.Rd:11: Lost braces
11 | item{Substance Name}{Preferred Chemical Substance Name}
| ^
checkRd: (-1) chem_wiki.Rd:12: Lost braces
12 | item{IUPAC Name}{IUPAC Chemical Name}
| ^
checkRd: (-1) chem_wiki.Rd:12: Lost braces
12 | item{IUPAC Name}{IUPAC Chemical Name}
| ^
checkRd: (-1) chem_wiki.Rd:13: Lost braces
13 | item{Molecular Formula}{Chemical Molecular Formula}
| ^
checkRd: (-1) chem_wiki.Rd:13: Lost braces
13 | item{Molecular Formula}{Chemical Molecular Formula}
| ^
checkRd: (-1) chem_wiki.Rd:14: Lost braces
14 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
| ^
checkRd: (-1) chem_wiki.Rd:14: Lost braces
14 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
| ^
checkRd: (-1) chem_wiki.Rd:15: Lost braces
15 | item{InChI}{International Chemical Identifier (InChI) Chemical Structural Notation}
| ^
checkRd: (-1) chem_wiki.Rd:15: Lost braces
15 | item{InChI}{International Chemical Identifier (InChI) Chemical Structural Notation}
| ^
checkRd: (-1) chem_wiki.Rd:16: Lost braces
16 | item{InChIKey}{Hashed Version of the InChI}
| ^
checkRd: (-1) chem_wiki.Rd:16: Lost braces
16 | item{InChIKey}{Hashed Version of the InChI}
| ^
checkRd: (-1) chem_wiki.Rd:17: Lost braces
17 | item{Average Mass}{Average Chemical Molecular Mass}
| ^
checkRd: (-1) chem_wiki.Rd:17: Lost braces
17 | item{Average Mass}{Average Chemical Molecular Mass}
| ^
checkRd: (-1) chem_wiki.Rd:18: Lost braces
18 | item{Monoisotopic Mass}{Single Chemical Isotope Mass}
| ^
checkRd: (-1) chem_wiki.Rd:18: Lost braces
18 | item{Monoisotopic Mass}{Single Chemical Isotope Mass}
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... NONE
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... OK
Running ‘spelling.R’
- checking PDF version of manual ... [6s/11s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE