* installing *source* package ‘bcv’ ...
** package ‘bcv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/bcv/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-matrix-private.c -o bcv-matrix-private.o
bcv-matrix-private.c:126:31: warning: variable 'n' set but not used [-Wunused-but-set-variable]
126 | bcv_index_t idx, i, j, m, n, lda;
| ^
bcv-matrix-private.c:315:26: warning: variable 'k2' set but not used [-Wunused-but-set-variable]
315 | bcv_index_t m, n, k, k2;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-partition.c -o bcv-partition.o
bcv-partition.c:76:30: warning: variable 'k' set but not used [-Wunused-but-set-variable]
76 | bcv_index_t i, m, mc, n, k, *sets;
| ^
bcv-partition.c:142:30: warning: variable 'k' set but not used [-Wunused-but-set-variable]
142 | bcv_index_t size = 0, n, k;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-svd-gabriel-rep.c -o bcv-svd-gabriel-rep.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-svd-gabriel.c -o bcv-svd-gabriel.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-svd-impute.c -o bcv-svd-impute.o
bcv-svd-impute.c:262:23: warning: variable 'i' set but not used [-Wunused-but-set-variable]
262 | bcv_index_t m, n, i, j, idx, incmu;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-svd-wold-rep.c -o bcv-svd-wold-rep.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-svd-wold.c -o bcv-svd-wold.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv-vector-private.c -o bcv-vector-private.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bcv_init.c -o bcv_init.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c r-cv-svd-gabriel.c -o r-cv-svd-gabriel.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c r-cv-svd-wold.c -o r-cv-svd-wold.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c r-impute-svd.c -o r-impute-svd.o
r-impute-svd.c:86:26: warning: variable 'lda' set but not used [-Wunused-but-set-variable]
86 | bcv_index_t i, m, n, lda, result = 0;
| ^
r-impute-svd.c:112:26: warning: variable 'lda' set but not used [-Wunused-but-set-variable]
112 | bcv_index_t i, m, n, lda;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o bcv.so bcv-matrix-private.o bcv-partition.o bcv-svd-gabriel-rep.o bcv-svd-gabriel.o bcv-svd-impute.o bcv-svd-wold-rep.o bcv-svd-wold.o bcv-vector-private.o bcv_init.o r-cv-svd-gabriel.o r-cv-svd-wold.o r-impute-svd.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/bcv/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/bcv/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/bcv/src'
installing to /data/gannet/ripley/R/packages/tests-clang/bcv.Rcheck/00LOCK-bcv/00new/bcv/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bcv)