* installing *source* package ‘apcf’ ...
** this is package ‘apcf’ version ‘0.3.2’
** package ‘apcf’ successfully unpacked and MD5 sums checked
** using staged installation
configure: CC: /usr/local/clang20/bin/clang -std=gnu23
configure: CXX: /usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17
checking for geos-config... /usr/bin/geos-config
checking geos-config usability... yes
configure: GEOS: 3.12.2
checking GEOS version >= 3.4.0... yes
checking for gcc... /usr/local/clang20/bin/clang -std=gnu23
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang20/bin/clang -std=gnu23 accepts -g... yes
checking for /usr/local/clang20/bin/clang -std=gnu23 option to enable C11 features... -std=gnu11
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for geos_c.h... yes
checking geos: linking with -L/usr/lib64 -lgeos_c... yes
configure: Package CPP flags:  -I/usr/include
configure: Package LIBS:  -L/usr/lib64 -lgeos_c
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘clang version 20.1.0-rc3’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/apcf/src'
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c geos_stuff.cpp -o geos_stuff.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c import_export.cpp -o import_export.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c pcf_envelope.cpp -o pcf_envelope.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c rand_dists_ratios.cpp -o rand_dists_ratios.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o apcf.so RcppExports.o geos_stuff.o import_export.o pcf_envelope.o rand_dists_ratios.o -L/usr/lib64 -lgeos_c
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/apcf/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/apcf/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/apcf/src'
installing to /data/gannet/ripley/R/packages/tests-clang/apcf.Rcheck/00LOCK-apcf/00new/apcf/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (apcf)