* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/anocva.Rcheck’
* using R Under development (unstable) (2025-02-15 r87725)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 20.1.0-rc2
    flang version 20.1.0-rc2
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘anocva/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘anocva’ version ‘0.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘anocva’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/anocva-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) anocva.Rd:16: Lost braces; missing escapes or markup?
    16 | \item{id}{A list in range {1,2,...,n}, where id[i] identifies the population id for the i-th subject.}
       |                           ^
checkRd: (-1) anocva.Rd:20: Lost braces; missing escapes or markup?
    20 | \item{r}{The optimal number of clusters. If NULL, then it will be estimated by the slope criterion in the interval {2..20}.}
       |                                                                                                                    ^
checkRd: (-1) anocvaStats.Rd:14: Lost braces; missing escapes or markup?
    14 | \item{id}{A list in range {1,2,...,n}, where id[i] identifies the population id for i-th subject.}
       |                           ^
checkRd: (-1) checkNClust.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{If the number of clusters has not been set, estimates it by using Slope criterion in the range {2, 20}.}
       |                                                                                                       ^
checkRd: (-1) checkNClust.Rd:24: Lost braces; missing escapes or markup?
    24 | If the number of clusters has not been set, estimates it by using Slope criterion in the range {2, 20}.
       |                                                                                                ^
checkRd: (-1) checkRange01.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Check for {0,1} Interval Normalization.}
       |                  ^
checkRd: (-1) checkRange01.Rd:16: Lost braces; missing escapes or markup?
    16 | Verifies if the data is normalized in the range {0,1}.
       |                                                 ^
checkRd: (-1) checkRange01.Rd:13: Lost braces; missing escapes or markup?
    13 | The data matrix normalized in the range {0,1}.
       |                                         ^
checkRd: (-1) nClust.Rd:26: Lost braces; missing escapes or markup?
    26 | verified in the range {2,..., maxClust}.
       |                       ^
checkRd: (-1) nClustMulti.Rd:26: Lost braces; missing escapes or markup?
    26 | verified in the range {2,..., maxClust}. Takes the mean of all samples in order to perform the estimation.
       |                       ^
checkRd: (-1) optimalSlope.Rd:6: Lost braces; missing escapes or markup?
     6 | The optimal number of clusters will be verified in the range {2,..., maxClust}.}
       |                                                              ^
checkRd: (-1) optimalSlope.Rd:22: Lost braces; missing escapes or markup?
    22 | The optimal number of clusters will be verified in the range {2,..., maxClust}.
       |                                                              ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [9s/11s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE