* installing *source* package ‘almanac’ ...
** package ‘almanac’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/almanac/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c adjustments.cc -o adjustments.o
In file included from adjustments.cc:1:
In file included from ./adjustments.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c alma-next.cc -o alma-next.o
In file included from alma-next.cc:1:
In file included from ./alma-next.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c alma-search.cc -o alma-search.o
In file included from alma-search.cc:1:
In file included from ./alma-search.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c alma-step.cc -o alma-step.o
In file included from alma-step.cc:1:
In file included from ./alma-step.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c exports.cc -o exports.o
In file included from exports.cc:1:
In file included from ./exports.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c init.cc -o init.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c initialize.cc -o initialize.o
In file included from initialize.cc:1:
In file included from ./initialize.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
In file included from init.cc:7:
In file included from ./exports.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c months.cc -o months.o
In file included from months.cc:1:
In file included from ./months.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c utils.cc -o utils.o
In file included from utils.cc:1:
In file included from ./utils.h:4:
./r.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
    4 | #define R_NO_REMAP
      |         ^
<command line>:2:9: note: previous definition is here
    2 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o almanac.so adjustments.o alma-next.o alma-search.o alma-step.o exports.o init.o initialize.o months.o utils.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/almanac/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/almanac/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/almanac/src'
installing to /data/gannet/ripley/R/packages/tests-clang/almanac.Rcheck/00LOCK-almanac/00new/almanac/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (almanac)