• using R Under development (unstable) (2024-11-09 r87314)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 19.1.3     flang-new version 19.1.3
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘afc/DESCRIPTION’ ... OK
• this is package ‘afc’ version ‘1.4.0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘afc’ can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... NOTE checkRd: (-1) afc.Rd:56: Lost braces; missing escapes or markup?     56 | {0,1})\cr \emph{fcst}: vector of same length as \emph{obsv} with dichotomous        | ^ checkRd: (-1) afc.Rd:57: Lost braces; missing escapes or markup?     57 | forecasts (values in {0,1}) \cr        | ^ checkRd: (-1) afc.Rd:60: Lost braces; missing escapes or markup?     60 | {0,1})\cr \emph{fcst}: vector of same length as \emph{obsv} with        | ^ checkRd: (-1) afc.Rd:61: Lost braces; missing escapes or markup?     61 | polychotomous forecasts (values in {1,..,m}) \cr        | ^ checkRd: (-1) afc.Rd:64: Lost braces; missing escapes or markup?     64 | {0,1})\cr \emph{fcst}: vector of same length as \emph{obsv} with forecast        | ^ checkRd: (-1) afc.Rd:68: Lost braces; missing escapes or markup?     68 | {0,1})\cr \emph{fcst}: vector of same length as \emph{obsv} with real-valued        | ^ checkRd: (-1) afc.Rd:72: Lost braces; missing escapes or markup?     72 | {0,1})\cr \emph{fcst}: two-dimensional array with ensemble forecasts;        | ^ checkRd: (-1) afc.Rd:76: Lost braces; missing escapes or markup?     76 | in {1,..,m})\cr \emph{fcst}: vector of same length as \emph{obsv} with        | ^ checkRd: (-1) afc.Rd:77: Lost braces; missing escapes or markup?     77 | polychotomous forecasts (values in {1,..,m2}) \cr        | ^ checkRd: (-1) afc.Rd:80: Lost braces; missing escapes or markup?     80 | in {1,..,m})\cr \emph{fcst}: two-dimensional array with forecast        | ^ checkRd: (-1) afc.Rd:85: Lost braces; missing escapes or markup?     85 | in {1,..,m})\cr \emph{fcst}: vector of same length as \emph{obsv} with        | ^ checkRd: (-1) afc.Rd:89: Lost braces; missing escapes or markup?     89 | in {1,..,m})\cr \emph{fcst}: two-dimensional array with ensemble forecasts;        | ^ checkRd: (-1) afc.Rd:93: Lost braces; missing escapes or markup?     93 | in {1,..,m})\cr \emph{fcst}: vector of same length as \emph{obsv} with        | ^ checkRd: (-1) afc.Rd:94: Lost braces; missing escapes or markup?     94 | polychotomous forecasts (values in {1,..,m}) \cr        | ^ checkRd: (-1) afc.dc.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with dichotomous observations (values in {0,1})}        | ^ checkRd: (-1) afc.dd.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with dichotomous observations (values in {0,1})}        | ^ checkRd: (-1) afc.dd.Rd:13: Lost braces; missing escapes or markup?     13 | (values in {0,1})}        | ^ checkRd: (-1) afc.de.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with dichotomous observations (values in {0,1})}        | ^ checkRd: (-1) afc.dm.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with dichotomous observations (values in {0,1})}        | ^ checkRd: (-1) afc.dm.Rd:13: Lost braces; missing escapes or markup?     13 | forecasts (values in {1,..,m})}        | ^ checkRd: (-1) afc.dp.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with dichotomous observations (values in {0,1})}        | ^ checkRd: (-1) afc.mc.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with polychotomous observations (values in {1,..,m})}        | ^ checkRd: (-1) afc.me.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with polychotomous observations (values in {1,..,m})}        | ^ checkRd: (-1) afc.mm.Rd:11: Lost braces; missing escapes or markup?     11 | \item{obsv}{vector with polychotomous observations (values in {1,..,mv})}        | ^ checkRd: (-1) afc.mm.Rd:14: Lost braces; missing escapes or markup?     14 | forecasts (values in {1,..,mf})}        | ^ checkRd: (-1) afc.mp.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with polychotomous observations (values in {1,..,m})}        | ^ checkRd: (-1) afc.nn.Rd:11: Lost braces; missing escapes or markup?     11 | \item{obsv}{vector with polychotomous observations (values in {1,..,m})}        | ^ checkRd: (-1) afc.nn.Rd:14: Lost braces; missing escapes or markup?     14 | forecasts (values in {1,..,m})}        | ^ checkRd: (-1) afc.np.Rd:10: Lost braces; missing escapes or markup?     10 | \item{obsv}{vector with dichotomous observations (values in {0,1})}        | ^ checkRd: (-1) cnrm.nino34.cc.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.cc.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.cc.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.ce.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.ce.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.ce.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dc.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dc.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dc.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dd.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dd.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dd.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.de.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.de.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.de.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dm.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dm.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dm.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dp.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dp.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.dp.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mc.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mc.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mc.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.me.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.me.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.me.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mm.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mm.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mm.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mp.Rd:7: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mp.Rd:8: Escaped LaTeX specials: \$ checkRd: (-1) cnrm.nino34.mp.Rd:9: Escaped LaTeX specials: \$
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... OK
• checking PDF version of manual ... [8s/14s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 NOTE