* installing *source* package ‘WpProj’ ...
** this is package ‘WpProj’ version ‘0.2.3’
** package ‘WpProj’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 20.1.0-rc2’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/WpProj/src'
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c RcppExports.cpp -o RcppExports.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c SufficientStatistics.cpp -o SufficientStatistics.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c W2penalized.cpp -o W2penalized.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c oem_xtx.cpp -o oem_xtx.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c progress_cleanup.cpp -o progress_cleanup.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c selectionVarMeanGeneration.cpp -o selectionVarMeanGeneration.o
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/approxOT/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RSpectra/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c utils.cpp -o utils.o
In file included from RcppExports.cpp:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from selectionVarMeanGeneration.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from W2penalized.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from selectionVarMeanGeneration.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from W2penalized.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from selectionVarMeanGeneration.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from W2penalized.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from oem_xtx.cpp:1:
In file included from ./oem_xtx.h:5:
In file included from ./oem_base.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from oem_xtx.cpp:1:
In file included from ./oem_xtx.h:5:
In file included from ./oem_base.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from oem_xtx.cpp:1:
In file included from ./oem_xtx.h:5:
In file included from ./oem_base.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:4:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from selectionVarMeanGeneration.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from W2penalized.cpp:1:
In file included from ./WpProj_types.h:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from oem_xtx.cpp:1:
In file included from ./oem_xtx.h:5:
In file included from ./oem_base.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from utils.cpp:1:
In file included from ./utils.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from utils.cpp:1:
In file included from ./utils.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from utils.cpp:1:
In file included from ./utils.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from utils.cpp:1:
In file included from ./utils.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
5 warnings generated.
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:239:166: warning: identifier '_cppi' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
239 | constexpr typename boost::multiprecision::literals::detail::signed_cpp_int_literal_result_type<static_cast<unsigned>((sizeof...(STR)) - 2u)>::number_type operator"" _cppi()
| ~~~~~~~~~~~^~~~~
| operator""_cppi
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:246:168: warning: identifier '_cppui' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
246 | constexpr typename boost::multiprecision::literals::detail::unsigned_cpp_int_literal_result_type<static_cast<unsigned>((sizeof...(STR)) - 2u)>::number_type operator"" _cppui()
| ~~~~~~~~~~~^~~~~~
| operator""_cppui
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:270:1: warning: identifier '_cppi128' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
270 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(128)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:189:1: note: expanded from here
189 | _cppi128
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:270:1: warning: identifier '_cppui128' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:190:1: note: expanded from here
190 | _cppui128
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:271:1: warning: identifier '_cppi256' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
271 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(256)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:191:1: note: expanded from here
191 | _cppi256
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:271:1: warning: identifier '_cppui256' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:192:1: note: expanded from here
192 | _cppui256
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:272:1: warning: identifier '_cppi512' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
272 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(512)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:193:1: note: expanded from here
193 | _cppi512
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:272:1: warning: identifier '_cppui512' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:194:1: note: expanded from here
194 | _cppui512
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:273:1: warning: identifier '_cppi1024' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
273 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(1024)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:195:1: note: expanded from here
195 | _cppi1024
| ^
In file included from W2penalized.cpp:3:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:273:1: warning: identifier '_cppui1024' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:196:1: note: expanded from here
196 | _cppui1024
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:239:166: warning: identifier '_cppi' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
239 | constexpr typename boost::multiprecision::literals::detail::signed_cpp_int_literal_result_type<static_cast<unsigned>((sizeof...(STR)) - 2u)>::number_type operator"" _cppi()
| ~~~~~~~~~~~^~~~~
| operator""_cppi
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:246:168: warning: identifier '_cppui' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
246 | constexpr typename boost::multiprecision::literals::detail::unsigned_cpp_int_literal_result_type<static_cast<unsigned>((sizeof...(STR)) - 2u)>::number_type operator"" _cppui()
| ~~~~~~~~~~~^~~~~~
| operator""_cppui
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:270:1: warning: identifier '_cppi128' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
270 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(128)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:189:1: note: expanded from here
189 | _cppi128
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:270:1: warning: identifier '_cppui128' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:190:1: note: expanded from here
190 | _cppui128
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:271:1: warning: identifier '_cppi256' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
271 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(256)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:191:1: note: expanded from here
191 | _cppi256
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:271:1: warning: identifier '_cppui256' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:192:1: note: expanded from here
192 | _cppui256
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:272:1: warning: identifier '_cppi512' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
272 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(512)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:193:1: note: expanded from here
193 | _cppi512
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:272:1: warning: identifier '_cppui512' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:194:1: note: expanded from here
194 | _cppui512
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:273:1: warning: identifier '_cppi1024' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
273 | BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL(1024)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:254:199: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
254 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::signed_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppi, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:195:1: note: expanded from here
195 | _cppi1024
| ^
In file included from SufficientStatistics.cpp:1:
In file included from ./SufficientStatistics.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/transport.h:8:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/trans_hilbert.h:5:
In file included from /data/gannet/ripley/R/test-clang/approxOT/include/approxOT/hilbert_cgal.h:5:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Cartesian_d.h:27:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/PointCd.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Kernel_d/Tuple_d.h:21:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Quotient.h:37:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int.hpp:2356:
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:273:1: warning: identifier '_cppui1024' preceded by whitespace in a literal operator declaration is deprecated [-Wdeprecated-literal-operator]
/data/gannet/ripley/R/test-clang/BH/include/boost/multiprecision/cpp_int/literals.hpp:262:201: note: expanded from macro 'BOOST_MP_DEFINE_SIZED_CPP_INT_LITERAL'
262 | constexpr boost::multiprecision::number<boost::multiprecision::backends::cpp_int_backend<Bits, Bits, boost::multiprecision::unsigned_magnitude, boost::multiprecision::unchecked, void> > operator"" BOOST_JOIN(_cppui, Bits)() \
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:33:26: note: expanded from macro 'BOOST_JOIN'
33 | #define BOOST_JOIN(X, Y) BOOST_DO_JOIN(X, Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:34:29: note: expanded from macro 'BOOST_DO_JOIN'
34 | #define BOOST_DO_JOIN(X, Y) BOOST_DO_JOIN2(X,Y)
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/helper_macros.hpp:35:30: note: expanded from macro 'BOOST_DO_JOIN2'
35 | #define BOOST_DO_JOIN2(X, Y) X##Y
| ^
<scratch space>:196:1: note: expanded from here
196 | _cppui1024
| ^
W2penalized.cpp:94:14: warning: unused variable 'same' [-Wunused-variable]
94 | const bool same = !(not_same);
| ^~~~
SufficientStatistics.cpp:140:7: warning: unused variable 'count' [-Wunused-variable]
140 | int count = 0;
| ^~~~~
5 warnings generated.
5 warnings generated.
16 warnings generated.
16 warnings generated.
/usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o WpProj.so RcppExports.o SufficientStatistics.o W2penalized.o oem_xtx.o progress_cleanup.o selectionVarMeanGeneration.o utils.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/WpProj/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/WpProj/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/WpProj/src'
installing to /data/gannet/ripley/R/packages/tests-clang/WpProj.Rcheck/00LOCK-WpProj/00new/WpProj/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (WpProj)