* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/SpatialKWD.Rcheck’
* using R Under development (unstable) (2025-02-15 r87725)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 20.1.0-rc2
    flang version 20.1.0-rc2
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘SpatialKWD/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SpatialKWD’ version ‘0.4.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SpatialKWD’ can be installed ... [54s/154s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/SpatialKWD-00install.html' for details.
* used C++ compiler: ‘clang version 20.1.0-rc2’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/21s] OK
* checking Rd files ... NOTE
checkRd: (-1) CompareAll-function.rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareAll-function.rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareAll-function.rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareAll-function.rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareAll-function.rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareAll-function.rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareAll-function.rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareAll-function.rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToMany-function.rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToMany-function.rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToMany-function.rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToMany-function.rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToMany-function.rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToMany-function.rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToMany-function.rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToMany-function.rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToMany-function.rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToMany-function.rd:79: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToOne-function.rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToOne-function.rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToOne-function.rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToOne-function.rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) CompareOneToOne-function.rd:89: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToOne-function.rd:90: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToOne-function.rd:91: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToOne-function.rd:92: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToOne-function.rd:93: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CompareOneToOne-function.rd:94: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FocusArea-function.rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FocusArea-function.rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FocusArea-function.rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FocusArea-function.rd:44: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FocusArea-function.rd:82: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FocusArea-function.rd:83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FocusArea-function.rd:84: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FocusArea-function.rd:85: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FocusArea-function.rd:86: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FocusArea-function.rd:87: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking PDF version of manual ... [9s/21s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs