* installing *source* package ‘SemiCompRisks’ ...
** package ‘SemiCompRisks’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPscr.c -o BAFT_DPscr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPscr_Updates.c -o BAFT_DPscr_Updates.o
BAFT_DPscr_Updates.c:1574:42: warning: variable 'LL_negInf' set but not used [-Wunused-but-set-variable]
1574 | int i, j, k, n_ir, r_ind, wh_ri, u_, LL_negInf;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPsurv.c -o BAFT_DPsurv.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPsurv_Updates.c -o BAFT_DPsurv_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNscr.c -o BAFT_LNscr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNscr_Updates.c -o BAFT_LNscr_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNsurv.c -o BAFT_LNsurv.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNsurv_Updates.c -o BAFT_LNsurv_Updates.o
BAFT_LNsurv_Updates.c:140:64: warning: variable 'logprior' set but not used [-Wunused-but-set-variable]
140 | double eta, eta_prop, loglh, loglh_prop, logR, beta0_prop, logprior, logprior_prop;
| ^
BAFT_LNsurv_Updates.c:140:74: warning: variable 'logprior_prop' set but not used [-Wunused-but-set-variable]
140 | double eta, eta_prop, loglh, loglh_prop, logR, beta0_prop, logprior, logprior_prop;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScr.c -o BpeDpCorScr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScrSM.c -o BpeDpCorScrSM.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScrSM_Updates.c -o BpeDpCorScrSM_Updates.o
BpeDpCorScrSM_Updates.c:507:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
507 | double nu_lam, nu_lam_prop;
| ^
BpeDpCorScrSM_Updates.c:734:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
734 | double nu_lam, nu_lam_prop;
| ^
BpeDpCorScrSM_Updates.c:948:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
948 | double nu_lam, nu_lam_prop;
| ^
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScr_Updates.c -o BpeDpCorScr_Updates.o
3 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorSurv.c -o BpeDpCorSurv.o
BpeDpCorScr_Updates.c:514:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
514 | double nu_lam, nu_lam_prop;
| ^
BpeDpCorScr_Updates.c:746:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
746 | double nu_lam, nu_lam_prop;
| ^
BpeDpCorScr_Updates.c:965:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
965 | double nu_lam, nu_lam_prop;
| ^
BpeDpCorSurv.c:233:37: warning: variable 'pCP' set but not used [-Wunused-but-set-variable]
233 | double pRP, pBH, pSP, pBI, pDI, pCP, choice;
| ^
1 warning generated.
3 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorSurv_Updates.c -o BpeDpCorSurv_Updates.o
BpeDpCorSurv_Updates.c:186:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
186 | double nu_lam, nu_lam_prop;
| ^
BpeDpCorSurv_Updates.c:1261:18: warning: variable 'mu_temp' set but not used [-Wunused-but-set-variable]
1261 | double logR, mu_temp, zeta_temp;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScr.c -o BpeMvnCorScr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScrSM.c -o BpeMvnCorScrSM.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScrSM_Updates.c -o BpeMvnCorScrSM_Updates.o
BpeMvnCorScrSM_Updates.c:503:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
503 | double nu_lam, nu_lam_prop;
| ^
BpeMvnCorScrSM_Updates.c:731:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
731 | double nu_lam, nu_lam_prop;
| ^
BpeMvnCorScrSM_Updates.c:954:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
954 | double nu_lam, nu_lam_prop;
| ^
3 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScr_Updates.c -o BpeMvnCorScr_Updates.o
BpeMvnCorScr_Updates.c:503:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
503 | double nu_lam, nu_lam_prop;
| ^
BpeMvnCorScr_Updates.c:732:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
732 | double nu_lam, nu_lam_prop;
| ^
BpeMvnCorScr_Updates.c:955:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
955 | double nu_lam, nu_lam_prop;
| ^
3 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorSurv.c -o BpeMvnCorSurv.o
BpeMvnCorSurv.c:201:42: warning: variable 'pVP' set but not used [-Wunused-but-set-variable]
201 | double pRP, pBH, pSP, pBI, pDI, pCP, pVP, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorSurv_Updates.c -o BpeMvnCorSurv_Updates.o
BpeMvnCorSurv_Updates.c:181:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
181 | double nu_lam, nu_lam_prop;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScr.c -o BpeScr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScrSM.c -o BpeScrSM.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScrSM_Updates.c -o BpeScrSM_Updates.o
BpeScrSM_Updates.c:519:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
519 | double nu_lam, nu_lam_prop;
| ^
BpeScrSM_Updates.c:728:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
728 | double nu_lam, nu_lam_prop;
| ^
BpeScrSM_Updates.c:949:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
949 | double nu_lam, nu_lam_prop;
| ^
3 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScr_Updates.c -o BpeScr_Updates.o
BpeScr_Updates.c:520:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
520 | double nu_lam, nu_lam_prop;
| ^
BpeScr_Updates.c:736:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
736 | double nu_lam, nu_lam_prop;
| ^
BpeScr_Updates.c:958:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
958 | double nu_lam, nu_lam_prop;
| ^
3 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeSurv.c -o BpeSurv.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeSurv_Updates.c -o BpeSurv_Updates.o
BpeSurv_Updates.c:313:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
313 | double nu_lam, nu_lam_prop;
| ^
BpeSurv_Updates.c:518:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable]
518 | double nu_lam, nu_lam_prop;
| ^
2 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibCorSurv.c -o BweibCorSurv.o
BweibCorSurv.c:144:32: warning: variable 'pVP' set but not used [-Wunused-but-set-variable]
144 | double pRP, pSH, pSC, pCP, pVP, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibCorSurv_Updates.c -o BweibCorSurv_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScr.c -o BweibDpCorScr.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScrSM.c -o BweibDpCorScrSM.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScrSM_Updates.c -o BweibDpCorScrSM_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScr_Updates.c -o BweibDpCorScr_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorSurv.c -o BweibDpCorSurv.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorSurv_Updates.c -o BweibDpCorSurv_Updates.o
BweibDpCorSurv_Updates.c:553:18: warning: variable 'mu_temp' set but not used [-Wunused-but-set-variable]
553 | double logR, mu_temp, zeta_temp;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScr.c -o BweibMvnCorScr.o
BweibMvnCorScr.c:320:99: warning: variable 'pVP' set but not used [-Wunused-but-set-variable]
320 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, pMP, pCP1, pCP2, pCP3, pVP, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScrSM.c -o BweibMvnCorScrSM.o
BweibMvnCorScrSM.c:335:99: warning: variable 'pVP' set but not used [-Wunused-but-set-variable]
335 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, pMP, pCP1, pCP2, pCP3, pVP, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScrSM_Updates.c -o BweibMvnCorScrSM_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScr_Updates.c -o BweibMvnCorScr_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScr.c -o BweibScr.o
BweibScr.c:231:71: warning: variable 'pFP' set but not used [-Wunused-but-set-variable]
231 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScrSM.c -o BweibScrSM.o
BweibScrSM.c:237:71: warning: variable 'pFP' set but not used [-Wunused-but-set-variable]
237 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScrSM_Updates.c -o BweibScrSM_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScr_Updates.c -o BweibScr_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibSurv.c -o BweibSurv.o
BweibSurv.c:109:22: warning: variable 'pSC' set but not used [-Wunused-but-set-variable]
109 | double pRP, pSH, pSC, choice;
| ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibSurv_Updates.c -o BweibSurv_Updates.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Utilities.c -o Utilities.o
Utilities.c:6029:52: warning: variable 'log1' set but not used [-Wunused-but-set-variable]
6029 | double mu_k, sigSq_k, mixProb_den, val1, val2, log1, logk, temp;
| ^
Utilities.c:6029:58: warning: variable 'logk' set but not used [-Wunused-but-set-variable]
6029 | double mu_k, sigSq_k, mixProb_den, val1, val2, log1, logk, temp;
| ^
Utilities.c:6029:64: warning: variable 'temp' set but not used [-Wunused-but-set-variable]
6029 | double mu_k, sigSq_k, mixProb_den, val1, val2, log1, logk, temp;
| ^
Utilities.c:6382:35: warning: variable 'y2_temp' set but not used [-Wunused-but-set-variable]
6382 | double eta1, eta2, eta3, gam, y2_temp;
| ^
4 warnings generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
/usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o SemiCompRisks.so BAFT_DPscr.o BAFT_DPscr_Updates.o BAFT_DPsurv.o BAFT_DPsurv_Updates.o BAFT_LNscr.o BAFT_LNscr_Updates.o BAFT_LNsurv.o BAFT_LNsurv_Updates.o BpeDpCorScr.o BpeDpCorScrSM.o BpeDpCorScrSM_Updates.o BpeDpCorScr_Updates.o BpeDpCorSurv.o BpeDpCorSurv_Updates.o BpeMvnCorScr.o BpeMvnCorScrSM.o BpeMvnCorScrSM_Updates.o BpeMvnCorScr_Updates.o BpeMvnCorSurv.o BpeMvnCorSurv_Updates.o BpeScr.o BpeScrSM.o BpeScrSM_Updates.o BpeScr_Updates.o BpeSurv.o BpeSurv_Updates.o BweibCorSurv.o BweibCorSurv_Updates.o BweibDpCorScr.o BweibDpCorScrSM.o BweibDpCorScrSM_Updates.o BweibDpCorScr_Updates.o BweibDpCorSurv.o BweibDpCorSurv_Updates.o BweibMvnCorScr.o BweibMvnCorScrSM.o BweibMvnCorScrSM_Updates.o BweibMvnCorScr_Updates.o BweibScr.o BweibScrSM.o BweibScrSM_Updates.o BweibScr_Updates.o BweibSurv.o BweibSurv_Updates.o Utilities.o registerDynamicSymbol.o -L/usr/local/lib -lgsl -lgslcblas -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src'
installing to /data/gannet/ripley/R/packages/tests-clang/SemiCompRisks.Rcheck/00LOCK-SemiCompRisks/00new/SemiCompRisks/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SemiCompRisks)