* installing *source* package ‘RcppStreams’ ... ** package ‘RcppStreams’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 19.1.3’ using C++11 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src' /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c common.cpp -o common.o In file included from common.cpp:52: In file included from ../inst/include/streamulus.h:30: In file included from ../inst/include/engine.h:24: In file included from ../inst/include/graph.h:24: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13: /data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() ) | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here 408 | property_ptr m_property; | ^ ../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here 46 | class Graph : public BoostGraph | ^ /usr/local/clang19/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here 29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr { | ^ /usr/local/clang19/bin/../include/c++/v1/__config:711:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 711 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED' 688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ 1 warning generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c hello.cpp -o hello.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c movavg.cpp -o movavg.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c sliding.cpp -o sliding.o In file included from hello.cpp:47: In file included from ../inst/include/streamulus.h:30: In file included from ../inst/include/engine.h:24: In file included from ../inst/include/graph.h:24: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13: /data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() ) | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here 408 | property_ptr m_property; | ^ ../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here 46 | class Graph : public BoostGraph | ^ /usr/local/clang19/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here 29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr { | ^ /usr/local/clang19/bin/../include/c++/v1/__config:711:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 711 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED' 688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ In file included from movavg.cpp:28: In file included from ../inst/include/streamulus.h:30: In file included from ../inst/include/engine.h:24: In file included from ../inst/include/graph.h:24: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13: /data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() ) | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here 408 | property_ptr m_property; | ^ ../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here 46 | class Graph : public BoostGraph | ^ /usr/local/clang19/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here 29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr { | ^ /usr/local/clang19/bin/../include/c++/v1/__config:711:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 711 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED' 688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ In file included from sliding.cpp:27: In file included from ../inst/include/streamulus.h:30: In file included from ../inst/include/engine.h:24: In file included from ../inst/include/graph.h:24: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13: /data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() ) | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here 408 | property_ptr m_property; | ^ ../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here 46 | class Graph : public BoostGraph | ^ /usr/local/clang19/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here 29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr { | ^ /usr/local/clang19/bin/../include/c++/v1/__config:711:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 711 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/local/clang19/bin/../include/c++/v1/__config:688:49: note: expanded from macro '_LIBCPP_DEPRECATED' 688 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ 1 warning generated. 1 warning generated. 1 warning generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o RcppStreams.so RcppExports.o common.o hello.o movavg.o sliding.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src' installing to /data/gannet/ripley/R/packages/tests-clang/RcppStreams.Rcheck/00LOCK-RcppStreams/00new/RcppStreams/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppStreams)